Nocardioides daphniae: E2C04_12315
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Entry
E2C04_12315 CDS
T05939
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K23169
UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:
6.3.2.53
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp00550
Peptidoglycan biosynthesis
ndp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E2C04_12315 (murD)
Enzymes [BR:
ndp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.53 UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase
E2C04_12315 (murD)
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
NAD_binding_7
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
QCC77774
UniProt:
A0A4P7UD61
LinkDB
All DBs
Position
2506100..2507497
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AA seq
465 aa
AA seq
DB search
MPASSTRPASRPPSASATTTCCRRRTRRPPVRFSDLAGRRVVVWGYGREGASVTAHLRDL
GVDVTVADPDRTDGPHAEVAHGEEGRTRLLDADVVVKSPGVPVVHPLHLELVASGIEVTS
LTDLWLGDNAERVVAITGTKGKSTTASLLHHLLTAGGLRSSLRGNIGTSVLAETDPPAEV
VVMELSSYQAQSLTRSPRIVAVTSLFPEHLTWHGSLEAYFHDKLNAVAHGPETVVVPGDA
PEVVRRVRDRLSPGAQLLLTDSGGVHVDETGDVVWPDGTRVAAADLPLPGRHHAGNIALA
LRIAGLFDLSPTDLAAALRTFAPLPHRMEPVPSGDGRRWIDDSLATAPEAVVASLTSLPG
ERVSVVVGGDDRGLDFTPLVSHLRAHPDLVVLLVGPAGARIAAESPDLSARVFDFFGAAV
AWAGSAANPARVVLLSPGAPSYDEFADYTERSAAFRAAALAADGR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ctgcctgcctcgtcgacgaggccagcgtcgaggccgccttcggcttcagcgacgaccacc
tgctgccgccgtcgtacgagaaggccgcccgtgaggttctctgacctggccgggcgccgg
gtcgtggtctggggctacggacgcgagggcgcctcggtcaccgcgcacctgcgcgacctc
ggcgtcgacgtcaccgtcgccgacccggaccggaccgacggtccgcacgccgaggtggcc
cacggcgaggaggggcgtacgcggctgctcgacgccgatgtcgtcgtgaagtcgcccggc
gtccccgtcgtgcacccgctgcacctcgagctggtcgcctccgggatcgaggtcaccagc
ctcaccgacctgtggctgggcgacaacgccgagcgggtcgtcgcgatcaccggcaccaag
ggcaagtcgaccaccgccagcctcctgcaccacctgctcaccgccggcgggctgcgctcc
tcgctgcgcggcaacatcggcaccagcgtgctggccgagaccgatccgccggccgaggtc
gtggtcatggagctctccagctaccaggcgcagtcgctgacccgttcgccccggatcgtc
gcggtgacttcgctcttccccgagcacctcacctggcacggctcgctcgaggcctacttc
cacgacaagctcaacgcggtggcccacggccccgagaccgtggtcgtgccgggcgatgcc
ccggaggtcgtacgccgcgtgcgcgaccgcctctcccccggcgcccagctgctgctcacc
gactcgggcggcgtgcacgtcgacgagaccggtgacgtggtctggccagatggcacccgg
gtcgccgccgcggacctgccgctccccgggcgccaccacgccggcaacatcgcactggcg
ctgcggatcgccgggctcttcgacctctccccgaccgacctggccgccgcgttgcgcacc
ttcgcgccactgccgcaccggatggagcccgtgccctcgggcgacggccgccgctggatc
gacgacagcctcgccaccgcgcccgaggccgtcgtggcctcgctgacgtcactgcccggc
gagcgggtctcggtggtcgtcggcggtgacgaccggggcctcgacttcacccccctggtc
tcgcacctgcgcgcccaccccgacctggtggtgctgctggtgggcccggccggtgcgcgg
atcgctgccgagagcccggacctgtccgcccgagtcttcgacttcttcggcgctgccgtc
gcctgggccggctcggccgccaacccggccagggtcgtcctgctctcccccggcgccccg
agctacgacgagttcgccgactacaccgagcgctcggccgccttccgtgccgctgccctg
gctgccgacgggcgctga
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