Nocardioides daphniae: E2C04_13495
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Entry
E2C04_13495 CDS
T05939
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp03420
Nucleotide excision repair
ndp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E2C04_13495 (pcrA)
03430 Mismatch repair
E2C04_13495 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndp03400
]
E2C04_13495 (pcrA)
Enzymes [BR:
ndp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E2C04_13495 (pcrA)
DNA repair and recombination proteins [BR:
ndp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2C04_13495 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
E2C04_13495 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
CarD_TRCF_RID
ResIII
DEAD
DUF2385
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QCC77942
UniProt:
A0A4P7UCI9
LinkDB
All DBs
Position
complement(2756756..2759212)
Genome browser
AA seq
818 aa
AA seq
DB search
MESPFTLPGLEHLTPSEPAAPRSSGSPAAPAPARRGPTREALLEGLNDPQREAVVHEGSP
LLVVAGAGSGKTRVLTRRIAWLVAERGAHPGSILAITFTNKAAAEMKERVEELVGKRARL
MWVSTFHSSCVRILRKEADKLGYKSSFSIYDSADSKRLMGLVLKDLELDPKKYQPNAVLN
WISDRKNELVDVDQAAKDAKNAFEEAYVQAYRSYQRRLAEANAMDFDDLIMSTVHLFQAF
PDVRETYRRRFRHVLVDEYQDTNHAQYALIHQLCAHDPEESGAVGSGGERVAPAELMVVG
DADQSIYAFRGANIRNILDFEKDFADATSILLEQNYRSTQTILATANQVIGNNKGRKPKR
LWTDSGDGEKIVGWVADDEHAEARFVSDEIDRLVDAGHRPGDVAVFYRTNAQSRVFEEIF
MRTGQPYKVVGGVRFYERKEVRDALAYLRVLVNPADEISLRRILNTPKRGIGDRAEACVA
AYAERERVTFFEALTKAHLAPGIATRSLKNIQGFVDVMTEVQQMVEADERPDVILESILD
RSGYLAELEASDDPQDGTRVENLAELVAVAREFSEDPQAGPSADPADVEAGTVAPGLGDF
LERVALVADSDQIPDDDGDAGVVTLMTLHTAKGLEFPIVFLTGLEDGVFPHQRALGDSSE
LEEERRLAYVGITRARERLYVSRAVVRSAWGAPSHNPASRFIDEFPVDLVDWKRTADAAP
RWGRPDAYANTSTRLGAPTDAGRRNFSSAAARMDAVSKAKSAREIPSLSPGDRVVHDSFG
MGTVVALEGMAEKAVASVDFGSAGVKRLLLRYAPLEKL
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggaaagccccttcaccctccccggcctcgaacacctgaccccgtcggagcccgccgct
ccgcggagctcggggtctcctgctgcgcccgctccggcgcgacgtgggccgacgcgtgag
gcgctgctcgaggggctgaacgacccccagcgcgaggccgtcgtccacgaggggtcgccg
ctgctcgtggtggccggtgcggggtcgggcaagacccgcgtgctcacccgccgcattgcc
tggctggtggccgagcgcggtgcgcaccccggctcgatcctggcgatcaccttcaccaac
aaggccgcggccgagatgaaggagcgcgtcgaggagctggtcggcaagcgggcccggctg
atgtgggtctcgaccttccactcctcctgcgtgcggatcctgcgcaaggaggccgacaag
ctgggctacaagtccagcttctcgatctacgacagcgccgactccaagcgcctgatgggg
ctcgtgctcaaggacctcgagctcgacccgaagaagtaccagcccaacgcggtgctgaac
tggatctccgaccgcaaaaacgagctggtcgacgtcgaccaggccgccaaggacgcgaag
aacgcgttcgaggaggcgtacgtccaggcctaccgctcctaccagcggcgcctggcggag
gccaacgcgatggacttcgacgacctgatcatgtcgacggtgcacctcttccaggcgttc
cccgacgtgcgcgagacctaccgccgtcgcttccggcacgtgctggtcgacgagtaccag
gacaccaaccacgcgcagtacgcgctgatccaccagctctgcgcgcacgacccggaggag
tccggcgcggtcggctccggcggtgagcgcgtcgccccggccgagctgatggtcgtgggt
gacgccgaccagtcgatctacgccttccgcggcgccaacatccgcaacatcctcgacttc
gagaaggacttcgccgacgcgacctcgatcctgctggagcagaactaccgctcgacgcag
acgatcctggccaccgccaaccaggtcatcggcaacaacaaggggcgcaagcccaagcgg
ctgtggaccgactccggcgacggcgagaagatcgtcggctgggtggccgacgacgagcac
gccgaggcccgcttcgtctccgacgagatcgaccgcttggtcgacgccggccaccggccc
ggcgacgtcgccgtcttctaccgcaccaacgcgcagtcccgggtcttcgaggagatcttc
atgcgcaccggccagccctacaaggtcgtgggcggcgtccggttctacgagcgcaaggag
gtccgcgacgcgctcgcctacctgcgcgtgctggtcaacccggccgacgagatctcgctg
cgccgcatcctcaacacccccaagcgcggcatcggcgaccgggccgaggcctgcgtcgct
gcgtacgcggagcgcgagcgcgtcaccttcttcgaggcgttgaccaaggcgcacctcgct
ccgggcatcgccacgcggtccctgaagaacatccagggcttcgtcgacgtgatgaccgag
gtccagcagatggtggaggccgacgagcggcccgacgtcatcctcgagtcgatcctagac
cgctccggctacctggccgagctggaggcctccgacgacccgcaggacggcacccgcgtg
gagaacctcgccgagctcgtcgcggtcgcgcgtgagttctccgaggacccgcaggccggc
ccgtcggccgaccctgctgacgtcgaggccggcaccgtcgccccggggctcggtgacttc
ctggagcgggtcgccctggtcgccgacagcgaccagatccccgacgacgacggcgacgcc
ggggtggtcaccctgatgacgctgcacaccgcgaaggggctcgagttcccgatcgtcttc
ctcaccggcctggaggacggcgtcttcccgcaccagcgcgcgctcggcgactccagcgag
ctggaggaggagcgccggctggcctacgtcggcatcacccgggcccgcgagcggctgtac
gtctcccgtgcggtggtccgctcggcctggggcgccccctcgcacaacccggcctcccgg
ttcatcgacgagttccccgtcgacctcgtcgactggaaacgcaccgccgacgccgcgccg
cgttggggtcgtcccgacgcctacgccaacacgagtacgcggctcggggcgcccaccgac
gccgggcgccgcaacttctcctcggccgcagcccgcatggacgccgtctccaaggccaag
tcggcgcgcgagatcccgtcgctgtccccgggagaccgcgtcgtccacgactccttcggg
atgggcacggtcgtcgccctcgaggggatggccgagaaggcggtcgcctcggtcgacttc
ggctcggcgggggtcaagcggctgctgctgcgctacgccccgctcgagaagctctga
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