Nocardioides daphniae: E2C04_14255
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Entry
E2C04_14255 CDS
T05939
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E2C04_14255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndp03400
]
E2C04_14255
Enzymes [BR:
ndp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
E2C04_14255
DNA repair and recombination proteins [BR:
ndp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E2C04_14255
Prokaryotic type
E2C04_14255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CysG_dimeriser
DUF5671
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QCC78057
UniProt:
A0A4V1CWQ2
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All DBs
Position
2902199..2902897
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AA seq
232 aa
AA seq
DB search
MSGLPDLVDRGLMAPDWAEALVAVDPEIDARITAMGSFLRGELAAGRGYLPAGDAVFRAF
ERPLADVRVLVVGQDPYPTPGHPIGLSFAVARDVRPLPRSLTNIYRELEADLGVAPASHG
DLTAWSAQGVMLLNRVLTVAPGAAGSHRRRGWEQVTDAAIAALVRRGGPLVALLWGRDAQ
QLRGALGTTPVIESAHPSPLSASRGFFGSRPFSRVSAMLEEQGGGPIDWRLE
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagcggactccccgacctcgtggaccgaggcctgatggcccccgactgggcggaggca
ctggtcgcggtcgacccggagatcgacgcgcggatcaccgcaatggggtccttcctccgc
ggcgagctcgccgccgggcgcggctacctgccggcgggcgacgcggtcttccgggccttc
gagcgtccgctggccgacgtacgcgtgctggtcgtcgggcaggatccctaccccacgccc
ggccacccgatcgggttgagcttcgcggtggcccgggacgtacgcccccttccgcgcagc
ctgaccaacatctaccgcgagctcgaggccgacctgggcgtcgcgccggcgtcgcacggc
gacctgacggcatggtcggcccagggcgtgatgctgctcaaccgggtgctcacggtggcg
ccgggcgcggccggctcgcaccgcaggcgcgggtgggagcaggtcaccgacgcggccatc
gccgccctcgtacgccgcggcggcccgctggtcgcgctgctgtggggtcgcgacgcgcag
cagctcaggggcgcgctgggcacgacgccggtcatcgagtccgcgcacccctcgcccctg
tcggcgtcgcgcggcttcttcggctcgcgcccgttcagtcgcgtcagtgccatgctggag
gagcagggaggaggtccgatcgactggcgactggaataa
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