Nocardioides daphniae: E2C04_16255
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Entry
E2C04_16255 CDS
T05939
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
ndp
Nocardioides daphniae
Pathway
ndp00910
Nitrogen metabolism
ndp01100
Metabolic pathways
ndp01120
Microbial metabolism in diverse environments
ndp01310
Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:
ndp00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
E2C04_16255 (nirB)
Enzymes [BR:
ndp01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
E2C04_16255 (nirB)
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GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
NIR_SIR_ferr
Rubredoxin_C
DAO
NAD_binding_8
FAD_binding_2
GIDA
Pyr_redox_3
FAD_binding_3
3HCDH_N
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QCC78361
UniProt:
A0A4P7UG54
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All DBs
Position
complement(3302825..3305392)
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AA seq
855 aa
AA seq
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MTHLRKHLVVVGHGMVGHRFVQAAIERGLTETHDITVIGEERLPAYDRVALTSFFEVGAD
ALSLLPEGSYDDPRVRLLTGIEVTDLDTTARSVTLAGGEVLAYDVCVLATGAAPFVPPVP
GHDLPGCFVYRTIDDLEAIREAAATAKVGAVIGGGLLGLEAANALAQLGLETHVVEMAPR
LMAVQVDDAGGAMLRRHIEKLGLTIHAGAMTKGVVEADGRAAGLTLADRDEPVPAEVVVF
SAGIRPRDALARTAGLEVAERGGVLVDEQCRTSDPHVYAIGECAAPAGKMYGLVAPGYAM
AEVVADALLAGPGTFTGADMSTKLKLMGVDVASFGDAFATTPDSLELTYSDAVTGVYKKL
VISDDGTRLLGGILVGDASAYGILRPMAASGLPLPANPEELILPASSGSSVDVGLPDEAV
ICSCNNVTKAEITDRVARDDDPCADAACVTACSKAGATCGSCKPLVKKIVEDWFTSVGRT
VDTSMCEHFAMTRAELYDLVAVHGHTRFDDVVAAHGRGRGCEICKPAIASILASLLNHHV
LDDDAFALQDTNDRYLANIQKNGSYSVVPRIPGGEVTPEGLIVIGEVARDYGLYTKITGG
QRIDLFGARMEDLPAIWTRLVDAGFESGHAYGKSLRTVKSCVGSTWCRFGVQDSTSMAIA
LELRYRGLRSPHKLKGGVSGCARECAEARGKDFGVIATEKGWNLYVGGNGGAVPAHAQLL
ASDLDDETLVRYVDRFLMYYIRTADRLQRTSTWVDSLDGGLERVREVVVDDVLSLGSELE
AAMARHVGTYFDEWRATLEDPAKLARFTSFVNAPDVPDPHITFDTQRDQIVPATSTGPVL
VAASIPVGAPVGGAR
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacctgcgcaagcacctcgtggtcgtcggccacggcatggtcggtcaccgattc
gtccaggccgcgatcgagcggggcctcaccgagacccacgacatcaccgtgatcggtgag
gagcggctgcccgcctacgaccgggtcgcgctcacctccttcttcgaggtcggcgccgac
gcgctcagcctgctgccggagggttcctacgacgacccccgcgtacgcctgctcaccggc
atcgaggtcaccgatctcgacacgaccgcccgcagcgtgactctggcaggcggcgaggtg
ctggcgtacgacgtgtgcgtgctcgccacgggcgccgcaccgttcgtgccgccggtgccc
ggccacgacctgccgggttgctttgtctaccgcacgatcgacgacctggaggcgatccgc
gaggcggccgccaccgcgaaggtcggcgccgtgatcggcggtggactgctcgggctggag
gccgccaacgcgctggcccagctcggtctggagacccacgtcgtcgagatggcgccgcgc
ctgatggcggtccaggtcgacgacgccggtggcgcgatgctgcgccgccacatcgagaag
ctcgggctcaccatccacgccggcgccatgaccaagggggtcgtcgaggccgacggccgc
gccgccggactcaccctggccgaccgcgacgagccggtgccggccgaggtcgtcgtcttc
tccgccggcatccgcccccgcgacgcgctggcccgcaccgccggcctggaggtcgccgag
cgcggcggcgtcctggtcgacgagcagtgtcgaacctccgacccgcacgtctacgcgatc
ggggagtgcgccgcccccgccggcaagatgtacggcctggtcgcaccgggctacgcgatg
gccgaggtcgtcgccgacgccctgctcgccgggcccggcaccttcaccggcgccgacatg
tccaccaagctcaagctgatgggcgtcgacgtcgcctccttcggtgacgccttcgcgacc
acccccgacagcctcgagctcacctactccgacgccgtcaccggcgtctacaagaagctc
gtcatctccgacgacggcacccggctgctgggcggcatcctggtcggcgacgcgtcggcg
tacgggatcctccgcccgatggcggcctcgggcctgccgctccccgccaacccggaggag
ctgatcctcccggccagcagcggcagcagcgtcgacgtcggcctccccgacgaagcggtc
atctgctcctgcaacaacgtcaccaaggccgagatcaccgaccgcgtcgcccgcgacgac
gacccgtgcgccgacgccgcctgcgtcaccgcctgctccaaggccggcgccacctgcggc
tcctgcaagccgctggtcaagaagatcgtcgaggactggttcacctcggtcgggcggacc
gtcgacacctcgatgtgcgagcacttcgcgatgacccgcgccgagctctacgacttggtc
gcggtgcacggccacacccgcttcgacgacgtggtcgccgcccacggccgcggccgcggc
tgcgagatctgcaagcccgcgatcgcctcgatcctggccagcctgctcaaccaccacgtg
ctcgacgacgacgccttcgcgctccaggacaccaacgaccgctacctggccaacatccag
aagaacggctcctactcggtcgtcccgcgcatccccggcggcgaggtcacccccgagggg
ctgatcgtgatcggtgaggtggcccgcgactacgggctctacacgaagatcaccggcggc
cagcggatcgacctcttcggcgcccgcatggaggaccttccggcgatctggacgcggctg
gtcgacgccggcttcgagtccggccacgcctacggcaagtcgctgcgcacggtgaagtcg
tgcgtcggctcgacctggtgccgcttcggcgtccaggactccacgtcgatggcgatcgcg
ttggagctgcgctaccgcggcctgcgctcgccgcacaagctcaagggcggcgtctccggc
tgcgcccgcgagtgcgcggaggcccgcggcaaggacttcggcgtgatcgccaccgagaag
ggctggaacctgtacgtcgggggcaacggcggcgccgtgcccgcccacgcgcagctgctg
gccagcgacctcgatgacgagacgctggtccgctacgtcgatcgcttcctcatgtactac
atccgcaccgccgaccgcctgcagcgcacctccacctgggtcgactcgctcgacggcggg
ctggagcgggtgcgcgaggtcgtcgtcgacgacgtgctcagcctcggcagcgagctggag
gcggcgatggcgcggcacgtagggacgtacttcgacgagtggagggcgacgctggaggac
ccggccaagctggcccgcttcacctccttcgtcaacgcccccgacgtgcccgacccgcac
atcaccttcgacacccagcgcgaccagatcgtgccggccacctcgaccggcccggtgctg
gtggcggcctcgatccccgtcggcgcccctgtgggcggtgcccgatga
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