Novosphingobium decolorationis: HT578_00290
Help
Entry
HT578_00290 CDS
T07993
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HT578_00290 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndr03019
]
HT578_00290 (groL)
03110 Chaperones and folding catalysts [BR:
ndr03110
]
HT578_00290 (groL)
03029 Mitochondrial biogenesis [BR:
ndr03029
]
HT578_00290 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ndr04147
]
HT578_00290 (groL)
Enzymes [BR:
ndr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HT578_00290 (groL)
Messenger RNA biogenesis [BR:
ndr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HT578_00290 (groL)
Chaperones and folding catalysts [BR:
ndr03110
]
Heat shock proteins
HSP60 / Chaperonin
HT578_00290 (groL)
Mitochondrial biogenesis [BR:
ndr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HT578_00290 (groL)
Exosome [BR:
ndr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HT578_00290 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HT578_00290 (groL)
Exosomal proteins of breast cancer cells
HT578_00290 (groL)
Exosomal proteins of colorectal cancer cells
HT578_00290 (groL)
Exosomal proteins of bladder cancer cells
HT578_00290 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SHOCT-like_DUF2089-C
Pho88
Motif
Other DBs
NCBI-ProteinID:
QVM82348
LinkDB
All DBs
Position
52462..54081
Genome browser
AA seq
539 aa
AA seq
DB search
MAAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKQNDKAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DLAVGTVVKDLESHAKKVSANSEIAQVATISANGDETVGRILAEAMDKVGNEGVITVEEA
KSLETELETVEGMQFDRGYLSPYFVTNAEKLKVELEDPYILIHEKKLSNLQAMIPLLEQV
VQSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTAGNV
VSEELGTKLENVTIGMLGRAKKVIIDKDNTTVVDGAGNKADIDARVSQIRAQIETTTSDY
DREKLQERVAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALL
RSLKSLEGLKAANDDQQSGIDIVRRALRAPARQIAENAGEDGAYIVGKLLEGDDYNHGFN
AATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPKEGTPAPMPAMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaaggaagtaaaatttgcgtcggatgcgcgtgatcgcatgctccgcggcgtg
gatacgcttgcaaatgcggtcaaggtaactctcggccccaagggccgcaacgtggtgatc
gagaagagcttcggtgcccctcgtatcaccaaggatggcgtgactgtcgccaaggagatc
gaactcaaggacaagttcgaaaatatgggcgcacagatgctgcgcgaagtcgccagcaag
cagaacgacaaggcaggtgatggcaccaccacggccaccgtcctggcccaggccatcgtg
cgcgaaggtgccaaggcagttgcggccggcatgaacccgatggacctgaagcgcggtatc
gacctcgccgtcggcaccgtggtcaaggacctcgaaagccacgccaagaaggtgtccgcc
aacagcgaaatcgcgcaggtcgcgaccatttccgccaatggcgacgaaaccgtcggccgc
atccttgccgaagccatggacaaggtcggcaatgaaggcgtgatcacggtcgaggaagcc
aagagcctcgagaccgaactcgaaacggtcgagggcatgcagttcgatcgcggctatctc
tcgccctatttcgtgaccaacgccgaaaagctgaaagtcgaactcgaagatccgtacatc
ctcatccacgagaagaagctgtcgaacctgcaggccatgattccgctgctggaacaggtc
gtgcagtcgggcaagccgttgctgatcatcgccgaggacgttgagggtgaagccctggca
accctggtggtcaacaagcttcgtggcggcctcaaggtcgcggcggtcaaggcaccgggc
ttcggcgatcgccgcaaggccatgctggaggacattgccatcctcaccgccggcaatgtg
gtcagcgaggaactcggcaccaagctggaaaatgtcaccatcggcatgctcggccgggcc
aaaaaggtcatcatcgacaaggacaacacgaccgtcgtcgatggtgccggcaacaaggcg
gacatcgacgcccgggtcagccagatccgtgcccagatcgagaccacgaccagcgactac
gaccgcgaaaaactgcaggagcgcgtggccaagctggctggcggcgttgccgttattcgc
gttggcggtgcgaccgaagtcgaggtcaaggagcgcaaggaccgtgtcgacgacgcgctg
catgcaacccgtgcggcggtcgaggaaggcattctgccgggcggcggcatcgccttgctc
cggtcgctcaagtcgctggagggcctcaaggccgccaatgacgaccagcagtccggtatc
gatatcgtgcgtcgcgcgctgcgcgccccggctcgccagattgccgagaacgccggcgag
gacggtgcctatatcgtcggcaagctgctcgaaggcgacgactacaaccacggcttcaac
gccgcgaccggcgaatatgaagacctggtgaagtcgggtgtcatcgatccggcgaaggtg
gtgcgcacagcgctgcaggatgcggcttcggtcgcctcgctgctgatcaccaccgaggcg
ctggtggccgaactgccgaaggaaggtacgcccgcaccgatgccggccatggacttctaa
DBGET
integrated database retrieval system
