Novosphingobium decolorationis: HT578_01030
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Entry
HT578_01030 CDS
T07993
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HT578_01030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_01030
Enzymes [BR:
ndr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HT578_01030
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HT578_01030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Nuf2_DHR10-like
DUF3482
CCDC93_CC
Motif
Other DBs
NCBI-ProteinID:
QVM85948
LinkDB
All DBs
Position
214310..214564
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AA seq
84 aa
AA seq
DB search
MDAQTPELDTLSFEDALRELETIVRQLESGEVPLEDSISLYEKGEKLRQHCQKRLDAAQA
RIEKIVTGPDGTPVSTQPFDTPER
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccagacacccgaactcgacacgctcagcttcgaagacgcgctgcgcgaactg
gaaaccattgtgcgccagctggaaagcggtgaagtgccgctggaggattcgatctcgctc
tatgaaaagggcgagaagctgcgccagcactgccagaagcggctcgatgccgcccaggcc
cggatcgagaagatcgtgaccggacccgacggtacgcccgtctccacccagcctttcgac
acgccggagcgctga
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