Novosphingobium decolorationis: HT578_01085
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Entry
HT578_01085 CDS
T07993
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ndr01002
]
HT578_01085
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ndr01011
]
HT578_01085
Peptidases and inhibitors [BR:
ndr01002
]
Cysteine peptidases
Family C82
HT578_01085
Peptidoglycan biosynthesis and degradation proteins [BR:
ndr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HT578_01085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QVM82479
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All DBs
Position
223247..224341
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AA seq
364 aa
AA seq
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MDAQTRPWSQRELAALKAAAGALPDHGLRPLDTSVLEDAREGGDAEALASAAQELALDLA
RTALLGEASARMRSGWHIADPDAEIDIAAWLARARAGGGLTSFLDALWPDHPDYGALQKA
FVQETDPQRRATLARNMERWRWLPHRMEPDYILVNTAAFTAHLWRKGAQVGLWPVIVGKV
STPSPTFRAEVRGVILNPWWNIPQSIVRENNGRFPASRGYVRTGGRWRQKPGPNNALGQM
KLDMPNPYSVYMHDTPGKALFEREVRAFSHGCIRTGDALGFAATLLEGAATQAQIDAVLA
SRRETRLALGKALPVYITYFTAGRAQDGGGVELYPDIYGRDARMAAAVASSEGAMQETEC
ALSG
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcgcaaacgaggccctggtcgcagagggaactggccgctctcaaggcagcggcg
ggggctctgcctgaccatggtctgcgcccgctcgacacctcggtgttggaggatgcacga
gagggcggtgatgccgaagcccttgccagcgcggcgcaggagcttgccctcgacctggcc
cggaccgctctgctgggcgaggcatctgcccgcatgcgcagcggctggcacatcgccgat
cccgacgccgagatcgacatcgccgcatggctggcccgggcgcgggccgggggagggctg
acctcgttcctggatgcgctgtggccggaccatccggactacggggctttgcaaaaggct
ttcgtgcaggaaaccgatccccaacggcgcgccacgctcgcgcggaacatggagcgctgg
cgctggctgccccaccgcatggaacccgactacattctcgtcaatacggcggccttcacg
gcacatctgtggcgtaaaggggcgcaggtcggtctctggcctgtcatcgtgggcaaggtc
tcgaccccgtcgcccaccttccgagccgaagtgcgcggggtcatcctcaatccctggtgg
aacatcccgcagagcatcgtgcgtgagaacaacggtcggttcccggccagcaggggctac
gtgcgcacgggcggacgttggcgccagaagccggggccgaacaacgcgctgggccagatg
aagctcgacatgcccaatccctatagcgtctacatgcacgacacaccgggcaaggcgctg
ttcgagcgcgaggtgcgcgccttcagccacggctgtatccgcaccggggacgcgctcggc
tttgcggcaaccttgttggaaggggcagccacgcaggcccagatcgacgcagtccttgca
tcgcggcgcgagacccgcctggcgctgggcaaggcgctgccggtctacattacctatttc
acggctggccgcgcgcaggacgggggcggggtggagctctatcccgacatctacggacgc
gatgcgcgtatggcggcggccgtggcttcttccgagggcgcaatgcaggagaccgagtgc
gccctgagcggctga
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