Novosphingobium decolorationis: HT578_01235
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Entry
HT578_01235 CDS
T07993
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00740
Riboflavin metabolism
ndr00790
Folate biosynthesis
ndr01100
Metabolic pathways
ndr01110
Biosynthesis of secondary metabolites
ndr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
HT578_01235 (ribB)
00790 Folate biosynthesis
HT578_01235 (ribB)
Enzymes [BR:
ndr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
HT578_01235 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
HT578_01235 (ribB)
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Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
HTH_3
HTH_26
HTH_35
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
QVM82508
UniProt:
A0ABX8E0Q1
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All DBs
Position
complement(251215..252516)
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AA seq
433 aa
AA seq
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MPSKVIDQVRKLITEGGMSRAGLARAAGLHANTLRDCTEESWNPTTETLAKLEHVLFSND
ETPVLVPIEDIIDEARNGRMFILVDDEDRENEGDLVIPAQMATPAAINFMATHGRGLICL
SLTNQRVDELGLDLMSQHNGTRHETAFTTSIEAREGVTTGISAGDRARTVSVAIDGTKSK
ADIVTPGHVFPLRARDGGVLVRTGHTEAAVDISRLAGLNPSGVICEIMKDDGTMARMDDL
VSFARLHDLKIGTIRDLIAYRRKHDRMVEKTNELTFTSRHGGQWTACCYHNRATGDETIA
LVKGRIDPTQPTLVRMHTLSTFVDIFGEESQDRSDLLQRSMKIIAEEGSGVIVVINSPMS
QSFSEVMDLKRQFRDGKNPDLEELRDYGVGAQILAELGIHDMILLTNTRHSLVALEGYGL
DIVGERPITSSES
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaaagtcatcgaccaggtccgcaagctcatcaccgaaggcggcatgagccgc
gccgggcttgcccgcgccgccggcctccacgccaacaccctgcgcgactgcaccgaggaa
agctggaaccccaccaccgaaaccctcgccaaactcgagcacgtccttttctcgaacgat
gagacccccgtccttgtccccatcgaggacatcatcgacgaggcgcgcaacggccgaatg
ttcatcctcgtcgacgacgaggaccgcgagaacgagggcgacctcgtcattccggcgcag
atggccacgcccgccgcgatcaacttcatggccacccacggccgcggcctcatctgcctc
tcgctcaccaaccagcgcgtcgacgaacttggcctcgacctgatgagccagcacaacggc
acccggcacgaaaccgccttcaccacctcgatcgaggcgcgcgagggcgtgaccacgggc
atctccgccggtgaccgcgcccgcaccgtttcggttgccatcgacggcaccaagtccaag
gcggacatcgttacccccggccacgtcttcccactgcgcgcccgtgatggcggggtcctc
gtgcgtaccggccacaccgaagccgcggtcgacatctcgcgccttgccggcctcaatccc
tcgggcgtgatctgcgagatcatgaaggacgacgggacgatggcccgcatggacgacctc
gtcagcttcgcgcgactccacgatctcaagatcggcaccattcgcgatctcatcgcctac
cgccgcaagcacgaccgcatggtcgagaagaccaacgagctgaccttcacgagccgccat
ggcggccagtggacggcctgctgctaccacaaccgcgcgaccggcgatgagaccatcgcg
ctggtgaaggggcgcatcgaccccacacagccgacgctggtgcgcatgcacaccctctcc
accttcgtggacatctttggcgaggaatcgcaggatcgctccgacctcctgcagcgctcg
atgaagatcatcgccgaggaaggctccggcgtcatcgtcgtcatcaacagcccgatgtcg
caatctttctccgaagtgatggacctcaagcgccagttccgcgatggaaagaatccggac
ctggaggaactgcgcgattacggcgtgggcgcgcagatcctggccgaactgggaatccac
gacatgatcctcctgaccaacacccgtcattcgctcgtcgcgctcgaaggctacggcctc
gatatcgtcggcgaacgccccatcacgtccagcgaaagctaa
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