Novosphingobium decolorationis: HT578_01560
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Entry
HT578_01560 CDS
T07993
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_01560 (radA)
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HT578_01560 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
DUF7125
AAA
RecA_N
AAA_16
Lon_C
AAA_22
AAA_30
nSTAND_NTPase5
NACHT
MCM
DUF7129
AAA_5
NTPase_1
Zeta_toxin
AAA_24
Glyco_hydro2_C5
SLFN-g3_helicase
nSTAND3
ABC_tran
DAP3
Motif
Other DBs
NCBI-ProteinID:
QVM82564
UniProt:
A0ABX8E1V1
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All DBs
Position
320766..322151
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AA seq
461 aa
AA seq
DB search
MAKPKRRYACQACGAVATRWQGQCADCGEWNTLVEEAPQTVFSSKHDLSSGGRPIVFTPL
DAPGELPVRRASGLAEFDRALGGGLVPGSAILMGGDPGIGKSTLLLQVSAHIATSGGSAV
YVSGEEAAGQVRLRAERLGLSKAPILMASATSVRDILTTLGNMDTPSLLVIDSIQTMHSD
QIEGAPGTVSQVRGCAFELIRYAKENGVTLILVGHVTKDGNIAGPRVLEHMVDVVMSFEG
ERSHQYRILRSLKNRFGPVDEIGVFAMEGAGLAEVGNPSMLFLSGREEPMAGSAVFPAME
GTRPVLIEIQALIVRLQSGATPRRAVVGWDNGRMAMLLAVLEARCGLNFSSAEVYLNVAG
GYRLSDPAADLAVAAALVSALGDKPLSSNAVWFGEVSLAGEIRPVAHSAIRQRESAKLGF
AKAFGPSSAAEQDSGGEGGKGLTFTGLGMLPNLVDRILSDA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcccaaacgtagatacgcctgccaggcttgtggcgccgtcgcgacacgttgg
cagggacaatgcgccgactgcggcgaatggaacaccctggtcgaggaggcgccgcagacg
gtcttctcctccaagcacgacctgtcctcgggtgggcggccgatcgtgttcactccgctc
gacgcgccgggcgaacttccggtgcgccgcgccagtggtcttgccgagttcgaccgtgcg
ctgggcggagggcttgtcccgggctcggcgatcctgatggggggcgatccgggcatcggc
aagtcgaccttgctgctccaggtctcggcgcacattgcaacttcgggcggcagcgcggtc
tatgtcagcggcgaggaagcggcaggtcaggtgcgcctgcgtgccgagcgtctggggctc
tccaaggcgccgatcctcatggcctcagcgacatccgtacgcgatatcctgacgacgctg
ggcaacatggacacgccctcgctgctcgtcatcgattcgatccagaccatgcattccgac
cagatcgagggtgcgccggggacggtcagccaggtgcgtggctgcgcgttcgagttgatc
cgctacgccaaggaaaacggggtgacgctgatccttgttgggcacgtcaccaaggacggc
aacatcgcgggcccgcgcgtgcttgagcacatggtcgatgtggtgatgagcttcgagggc
gagcgcagccaccagtaccgcatcttgcgcagcctcaagaaccgctttgggccggtcgac
gagatcggcgtcttcgcaatggaaggtgcagggcttgccgaggtcggcaacccttccatg
ctgttcctgtccggccgggaagagccgatggcgggcagcgcggtcttccctgcgatggag
ggcacacggccggtcctgatcgagatccaggcgctcatcgtgcggctccagagcggggcg
acgccgcgccgcgccgtcgtgggctgggacaacggccgcatggccatgctgctggcggta
ctggaagcgcgctgcgggctcaatttctccagtgcggaagtctatctcaacgttgcaggc
ggctaccggctatcggatccggccgccgatctggctgtggccgctgcccttgtctccgcg
cttggcgacaagccgctgtcgagcaacgcggtgtggttcggcgaggtctcgctcgccgga
gagatccgccccgtggcccattcagcgatccgacagcgcgaatcggcgaagctgggattt
gccaaggccttcggcccgtcctcggcggccgagcaggattcgggcggagagggtgggaag
gggctgaccttcaccggacttggcatgttacccaatctcgttgaccgcatcctgagcgat
gcctag
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