Novosphingobium decolorationis: HT578_01935
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Entry
HT578_01935 CDS
T07993
Name
(GenBank) DNA polymerase III subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr03030
DNA replication
ndr03430
Mismatch repair
ndr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HT578_01935
03430 Mismatch repair
HT578_01935
03440 Homologous recombination
HT578_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndr03032
]
HT578_01935
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_01935
Enzymes [BR:
ndr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HT578_01935
DNA replication proteins [BR:
ndr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HT578_01935
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HT578_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QVM82624
UniProt:
A0ABX8E211
LinkDB
All DBs
Position
419893..420864
Genome browser
AA seq
323 aa
AA seq
DB search
MTTGDFWGQDAAWQEWMRALGSQRMHHAWLLAGARGLGKKAFARAAASELVGHLPGSEID
AEAHPDIHILTPLPASDDDAKKKADGKPYQTKRNISVDQVREMIRKLATRPTLGDRRAII
VDPADDLEKGAVNALLKVLEEPPAGTYFLLLAHQPGRLLPTVRSRCRVLRFAPLNEDALG
AMLVREAPEADEAARQAAIRAAQGSPGLARTFVAQDLGAIHDLMVRILQNGDRDYALRGG
LSREMGMRPTRDRQLAAIELARAVLLAQLGETAGHQQLAIIEAYQSLSQLLVRAPTYNFD
AGVLIMEIGGLLASSAMPRERRA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgggcgatttctggggccaggatgccgcctggcaggaatggatgcgcgccctc
ggctcgcagcgcatgcaccatgcctggctgcttgccggggcgcgaggtcttggcaagaaa
gcctttgcgcgcgcggccgccagcgaactggtcggccatctgccaggtagtgaaatcgac
gcggaagcgcaccccgacattcatatcctgaccccgcttcccgcaagcgacgatgacgcc
aagaaaaaggcggacggcaagccctaccagaccaagcgcaacatctcggtcgaccaggtg
cgcgagatgatccgcaagctcgcgacgcgcccgacgctcggcgatcgtcgcgcgatcatc
gtcgatccggccgacgatctggagaagggcgccgtcaacgcgcttctcaaggtgctggag
gaaccgcctgccgggacttatttcctgctgcttgcccaccagcctggacgtcttctgccc
accgtacgctcgcgctgccgggtcctgcgctttgctccgctcaatgaggacgcgctgggc
gccatgctcgtgcgtgaggcccccgaggcggacgaagcggcccggcaagcggccattcgc
gcggcccagggctcgcccggccttgcccggaccttcgtggcgcaagacctgggtgcgatc
cacgatctgatggtgcggatcctccagaacggagaccgtgactatgcgctgcgtggcggc
ctatcgcgggaaatgggcatgcggcctacgcgggatcgccagctcgccgccattgaactg
gcgcgtgccgtactcctcgcgcaactgggcgagaccgcagggcaccagcaactcgcgatc
atcgaggcctaccagagcctcagccagcttctggtgcgcgcgccgacctacaatttcgac
gccggtgtcctcataatggagattggcgggttgctggcgtcctcggcaatgcctagagaa
cgtcgggcctag
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