Novosphingobium decolorationis: HT578_01940
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Entry
HT578_01940 CDS
T07993
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00450
Selenocompound metabolism
ndr00970
Aminoacyl-tRNA biosynthesis
ndr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HT578_01940
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HT578_01940
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ndr01007
]
HT578_01940
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndr03016
]
HT578_01940
Enzymes [BR:
ndr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
HT578_01940
Amino acid related enzymes [BR:
ndr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
HT578_01940
Transfer RNA biogenesis [BR:
ndr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HT578_01940
Prokaryotic type
Other AARSs
HT578_01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
QVM82625
UniProt:
A0ABX8E329
LinkDB
All DBs
Position
420930..422501
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AA seq
523 aa
AA seq
DB search
MGEPYYITTAISYPNGKPHIGHAYEAIAADVIARHRKAEGFDVRLQTGTDEHGLKMMQKA
RDLGTTPAELATEMSGYFREMCDALNVDYDVFIRTTEPRHHEATQELWRRMEAKGDLYLD
RYEGWYSVRDEAYYDESELVEGEGGAKLSPQGTPVEWTVEESWFFRLSRYEDKLLELYNS
GDFIRPESRRNEIARFVEGGLRDLSISRTSFDWGVKVPGSDNHVMYVWVDALTNYLTGLG
FPNEEGDYARYWPASLHLIGKDIVRFHTVYWPAFLMSADVPVPQQVFGHGFLLNRGQKES
KSVGNVTDPIALAETFGVDTLRYFFLREVAFGQDGSWSPEAIVTRCNAELANSFGNLAQR
SLSMIFKNMGGEIKSDLEKSDADVALFEAVASGISNMRKAFMDLAFSDGLDAWMKAVFAC
NQYVDEQAPWALRKTDPARMEAVLMTLFQVVRDLAIAVRPVVPSAIDALLDQMGVAADAR
GYEALEKSDWFAVLAASDYAVEKPQGVFPRLELPDDQAEGDAA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagccttattacatcaccaccgccatttcctaccccaacggcaagccccacatc
ggccacgcctacgaggcgattgccgccgacgtgattgcccgccatcgcaaggccgaaggc
ttcgatgtccgtctccagaccggcaccgacgaacacggcctcaagatgatgcagaaggcg
cgtgatctcgggacgacccccgcagaacttgctacggaaatgtccggatatttccgggag
atgtgcgacgctctcaacgtcgattatgacgtatttatccgtaccaccgagccgcgccat
cacgaggcgacgcaggaactgtggcgccggatggaagccaagggcgacctctatctcgac
cgctacgagggctggtactcggtccgcgacgaggcctattacgacgaaagtgagctcgtc
gaaggggaagggggcgccaagctctctccgcagggcacgccggtggagtggaccgtcgag
gaatcgtggttcttccgcctgtccaggtacgaggacaagctgctcgagctctacaacagc
ggcgacttcatccgaccggaaagccgccgcaacgagatcgcccgcttcgtggaaggtggc
cttcgcgacctctcgatctcccgcaccagtttcgattggggtgtgaaggttcccggctcg
gacaaccacgtcatgtatgtctgggtcgatgccctgaccaactacctgaccggcctgggt
ttcccgaacgaggaaggcgactacgcccgctactggcccgcgagcctgcaccttatcggc
aaggacatcgtgcgcttccacacggtctattggcccgcgtttctgatgagcgcggacgta
cccgtgccgcagcaggtcttcggccacggcttcctcttgaaccgcggccagaaggaatcg
aagtcggtcggcaacgtgaccgatcccatcgcgctggccgagaccttcggtgtcgatacg
ctgcgctatttcttcctgcgcgaagtggccttcggacaggacggctcgtggtcgcccgaa
gccattgtcacgcgctgcaacgccgagctcgccaacagcttcggcaacctggcccagcgc
agcttgtccatgattttcaagaacatgggcggtgaaattaagtccgatttggagaaatct
gacgcggacgtggcgcttttcgaagcggttgcctcgggcatttccaacatgcgcaaggcg
ttcatggaccttgccttcagcgatggtcttgatgcctggatgaaggcggtcttcgcctgc
aaccagtatgtcgacgaacaggcgccctgggccctgcgcaagaccgatccggcgcgtatg
gaggctgtcctgatgaccctcttccaggtggtgcgcgatctggccatcgcggttcgtccg
gtggttcccagcgccatcgatgcgctgctcgaccagatgggcgtcgccgccgatgcgcgc
ggctatgaggcgttggagaagagcgactggttcgcggttctggccgcgtcggactatgcc
gtcgaaaagccgcagggtgtgttcccgcgtcttgaactgcccgacgatcaggccgaaggt
gacgcggcctga
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