Novosphingobium decolorationis: HT578_02290
Help
Entry
HT578_02290 CDS
T07993
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndr03032
]
HT578_02290 (gyrA)
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_02290 (gyrA)
Enzymes [BR:
ndr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HT578_02290 (gyrA)
DNA replication proteins [BR:
ndr03032
]
Prokaryotic type
DNA Topoisomerases
HT578_02290 (gyrA)
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HT578_02290 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QVM82684
LinkDB
All DBs
Position
492660..495449
Genome browser
AA seq
929 aa
AA seq
DB search
MSDQTENLDPTAPDGEYARIDIVDEMKSSYLDYAMSVIVSRALPDVRDGLKPVHRRILYA
CQEAGYVAGKPYRKSSRIVGDVMGKYHPHGDSAIYDALARLTQPWSMRLPLVDGQGNFGS
MDPDPPAAMRYTEARLDKSANELLSDIDKNTVDFADNYDGSESEPTVLPARFPNLLVNGA
GGIAVGMATNIPPHNLGEVIDGCFALMDDPTTSNEQLCEIIPGPDFPTAPLILGKSGARN
AYTTGRGSIMMRCRHEIEEGRGDRRSIVLTSIPYQVGKNNLVEKIAEAAKDKRIEGVSDI
RDESNREGVRVVIDLKRDASPEVVLNQVWRNTPAQSNFAANMLAIRGGRPEIMSLRDILQ
AFIHFREEVITRRTKYELNKARDRAHILLGLVVAVSNLDEVVKIIRGSSNPADARAKLLT
REWPIGDIAPYIRLVEAIEPNAEESDGVYRLSEVQVRAILDLRLHRLTALGRDEIGDELK
ELATAIEEYLSILADRVKLYGVMRDELKAVRDAYATPRMSEITAAFDGIDDEDLIEREDM
VVTVTMDGYIKRTPLSTFRAQARGGKGRAGMATKEEDAVATMFVTSTHNPVLFFSTAGKV
YRLKVYKLPEGGPTTRGRPIINMLPALDKDETIQTVLALPEDEAEWGKLSVVFATSKGNV
RRNLMDLFANIPSNGKYAIKFDLNADGTPSDDYLIGVALLDPDTDDVLLATRKGKAIRFA
GDQVRAFSSRTSTGVRGMNLKDDDRVISLSILHRVGTESDERDEYLKFAPWKGEREGTCS
LSEERQAELAEREEFILTVCANGYGKMSSAYEYRRIGRGGQGITNIDNIARNGDVVASFP
ATREQQLMLITDQAKMIRLPLETMRVIGRGSAGVRLFNVSKGEQVVGAVRLDEPAEEEIE
DIAVEAGTDVPATDAPAPDSEAPEGDSEA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaccagaccgaaaacctcgacccgaccgcccctgacggcgaatacgctcgtatc
gacatcgtcgatgagatgaagtcgagctatctcgattacgcgatgagcgtgatcgtgagc
cgcgcgcttcccgacgtacgcgatggcctcaagcccgtgcaccgacgcatcctctatgcg
tgtcaggaagccggctacgtcgctggcaagccttaccgcaagtcgagccgcatcgtcggt
gacgtcatgggtaaatatcacccccatggcgacagcgcgatctatgacgcccttgcgcgc
ctgacccagccctggtcgatgcgcctgccgctggtcgatggtcagggcaacttcggctcg
atggaccccgatccgccggccgccatgcgttacaccgaggctcgcctcgacaagagcgcc
aacgaacttctctcggacatcgacaagaacaccgtcgatttcgccgacaactacgacggc
tcggaaagcgagcccacggtccttcccgcccgcttccccaacctgctcgtcaacggcgca
ggcggcatcgcggtcggcatggctaccaacatccccccgcacaatctgggcgaggtgatc
gacggctgtttcgcgctgatggacgatccgaccaccagcaacgaacagctgtgcgagatc
attccggggcccgacttcccgaccgccccgctgatcctgggcaagagcggcgcgcgcaac
gcctacacgacgggccgcggctcgatcatgatgcgctgccgccacgagatcgaggaaggc
cggggcgaccgccgctcgatcgtcctcacctcgatcccctaccaggtcggcaagaacaac
ctggtcgagaagatcgccgaggccgccaaggacaagcgcatcgaaggcgtctcggacatc
cgtgacgaatcgaaccgcgaaggcgtgcgcgtggtcatcgacctcaagcgcgacgcttcg
cccgaggtcgtcctcaaccaggtctggcgcaacacgcccgcgcagtcgaacttcgcggcc
aacatgctcgcaatccggggcggccgccccgagatcatgagcctgcgcgacatcctgcag
gccttcatccacttccgcgaagaggtcattacccgccgcaccaagtacgagctgaacaag
gcgcgcgaccgtgcgcatatcttgctcggcctggtcgttgcggtctcgaacctcgacgaa
gtggtgaagatcatccgcggctcgtcgaacccggccgatgcgcgcgccaagctgcttacc
cgtgagtggccgatcggcgacatcgcgccctacatccgtctcgtcgaggcgatcgagccc
aacgccgaggaatcggacggtgtctaccgcctgtccgaagtccaggtccgcgcgatcctc
gacctgcgcctgcaccgtctcaccgcgctcggccgcgacgagatcggtgacgaactcaag
gaactggccaccgcgatcgaggaatacctctcgatcctcgccgaccgcgtgaagctctac
ggcgtcatgcgcgacgaactgaaggccgtgcgcgacgcctacgcgacgccgcgcatgtcc
gagatcaccgccgccttcgacgggatcgacgacgaagacctgatcgagcgcgaggacatg
gtcgtgaccgtcaccatggacggctacatcaagcgcaccccgctctcgaccttccgggcc
caggcgcgcggcggcaagggccgcgccggcatggcgacgaaggaggaggatgccgtcgcg
acgatgttcgtcacctccacccacaatccggtgctgttcttctcgaccgcgggcaaggtc
taccgcctcaaggtctacaagctgcccgaaggtggcccgacgacccgcggccgtccgatc
atcaacatgctgcccgccctcgacaaggacgagacgatccagaccgtgctcgccctcccg
gaggacgaggcggaatggggcaagctctcggtcgtgttcgccacgtccaagggcaacgtg
cgccgcaacctgatggacctgttcgcgaacattccctccaacggcaagtacgcgatcaag
ttcgatctcaacgccgatggcacgccgagcgacgattatctgatcggcgtggcgctgctt
gacccggataccgacgacgtgctcctcgccacacgcaagggcaaggcaatccgctttgcc
ggcgaccaggtccgcgcgttctcgagccgcacctcgacgggtgtgcgcggcatgaacctc
aaggacgacgaccgggtcatctcgctctcgatcctgcaccgcgtgggcaccgaatcggac
gaacgcgacgagtacctcaagttcgccccctggaagggtgagcgcgaaggcacctgctcg
ctctccgaggagcgccaggccgaactggccgagcgcgaggaattcatcctcacggtctgc
gccaacggctacggcaagatgtcctcggcctacgagtaccgccgcatcggtcgtggcggc
cagggcatcaccaacatcgacaacatcgcccgcaatggcgatgtggtggccagcttcccg
gcgacgcgcgagcagcagctcatgctcatcaccgaccaggccaagatgatccgcctcccg
ctcgaaaccatgcgcgtcatcggacgcggctcggcgggcgtgcgcctcttcaacgtctcc
aagggcgagcaggtcgtgggcgcggtgcgcctcgatgaaccggccgaagaggaaatcgag
gacatcgccgtcgaagcgggcacggacgttccggcgaccgatgctccggctccggacagt
gaagcgccggaaggcgacagcgaagcatga
DBGET
integrated database retrieval system
