Novosphingobium decolorationis: HT578_03060
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Entry
HT578_03060 CDS
T07993
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HT578_03060
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ndr01007
]
HT578_03060
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndr03016
]
HT578_03060
Enzymes [BR:
ndr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HT578_03060
Amino acid related enzymes [BR:
ndr01007
]
Aminoacyl-tRNA synthetase
Class I (A)
HT578_03060
Transfer RNA biogenesis [BR:
ndr03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HT578_03060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
DUF903
tRNA-synt_1b
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
QVM82819
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All DBs
Position
complement(684481..686100)
Genome browser
AA seq
539 aa
AA seq
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MTENALIEAARVSKAWPFQEAQKLLKRYPNGKSAADGSPEPILFETGYGPSGLPHIGTFQ
EVLRTTLVRRAYEALVGAKPEDGVTRLVAFSDDMDGLRKVPDNIPQAELLAANLGKPLSR
IPDPFGKFESFAHHNNAMLREFLDRFGFDYEFVSASDRYNSGRFDNALSSILSNYDAIMG
VMLPTLREERRKTYSPVLPVSPTTGVVLQVPVEVLDPATGMIRFTDEDGTTVEQSVFGGQ
AKLQWKVDWAMRWVDLGVDYEMCGKDLTDSVTQSGKIAKILGARRPEGLIYELFLDENGE
KISKSKGNGLTIEQWLTYGTEESLGFYLFREPKSAKQLHIDVIPKAVDEYWQFYGNLPKQ
ALDKQLGNPVWHLLRANGQDQNDVPAPPVTFALLLNLVGVLGANATREQVWSYLANYVES
ADPAEHPALDAMVSCALAYNRDYIAPTLQRRKPEGGEVAALAELDAQLAKVEANASAEEL
QNIVYEIGKDEQYGFESLRDWFKAQYETLLGSSQGPRMGSFIALYGVPETRKLIAEALA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaatgccctgatcgaagccgcccgtgtgtccaaggcctggcccttccaggag
gcccagaaactgctcaagcgctatcccaatggcaagagcgcagcagacggttctccagag
cctatcctgttcgagacgggatatggcccttcggggctgccgcatatcgggacgttccag
gaagtcctgcgcaccacgctggtgcgccgggcctacgaggcgctggtcggagcgaagccc
gaggacggcgtgacccggctggttgcgttctcggatgacatggacggcctgcgcaaggtg
ccggacaacattccccaggctgaacttctggctgcgaaccttggcaagccgctcagccgg
atccccgatccgttcggcaagttcgagagttttgcgcatcataacaacgcgatgctgcgt
gaatttctcgatcgcttcgggttcgactacgagttcgtttcggccagcgatcggtacaat
tcgggtcgcttcgacaatgccctgagcagcattctgagcaactacgatgccatcatgggc
gtgatgctgcccacgctgcgcgaggagcgtcgcaagacctattcgccggtgctgccggta
tctccgacgacgggcgtggtcctgcaggttccggtcgaggtcctcgatccggcgacgggc
atgatccgtttcaccgacgaggatggcacgactgtcgagcagagcgtgttcggtggtcag
gccaagctgcagtggaaggtcgactgggccatgcgctgggtggacctgggcgtcgattac
gagatgtgcggcaaggacctgaccgattcggtgacgcagtcgggcaagatcgccaagatc
ctcggggctcgccgtcccgaagggctgatctacgaattgttcctcgacgagaacggcgag
aagatctccaagtccaagggcaatggtctcaccatcgagcagtggctgacctacggcacc
gaggaatctctcggcttctacctgttccgcgagcccaagagcgccaagcagctgcatatc
gacgtgatcccgaaggccgtcgacgagtactggcagttctatggcaacctgcccaagcag
gcgctcgacaagcagctgggcaacccggtgtggcatctgctgcgcgccaacggccaggac
cagaacgacgttcccgcaccgccggtgaccttcgcgctgctcctgaaccttgtcggtgtg
ctgggcgccaacgccacgcgtgagcaggtctggtcctacctcgccaactacgtggagagc
gccgatccggccgagcatcccgcgctcgacgcgatggtgagctgcgcgctcgcctacaac
cgcgactacatcgcgccgaccctccagcgccgcaagcccgagggcggggaagtggccgcg
cttgccgagctcgatgcgcagctggccaaggtcgaggccaacgcctcggccgaggagctg
cagaacatcgtctacgagatcggcaaggacgagcagtacggctttgaaagcctgcgcgac
tggttcaaggcgcagtacgagacgctgctcggctccagccaggggccgcgcatgggcagc
ttcatcgcgctctacggtgtccccgagacgcgcaagctgattgccgaagcgctggcctga
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