KEGG   Novosphingobium decolorationis: HT578_03075
Entry
HT578_03075       CDS       T07993                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
ndr  Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:ndr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ndr03400]
    HT578_03075
Enzymes [BR:ndr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     HT578_03075
DNA repair and recombination proteins [BR:ndr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HT578_03075
SSDB
Motif
Pfam: Helicase_C_2 DEAD Helicase_C
Other DBs
NCBI-ProteinID: QVM82822
LinkDB
Position
687646..690366
AA seq 906 aa
MSAPRHPALHASHSGCWLHDGQGSARALSKGQAVTAVADAPHLILNAPLLATRLGYPDLA
GLDLLELYAFIHPARFVVPTPKGLADALGLPRPDADSEVPELLQRAAMRLLETCEQPDWA
EREGAWTSLQSLVKMRWPWAKLLAPRLAKPQKAERWIFTRLPEWEESPEPPQPRQLNIPD
GAVLDRLAHLTGQGAEERAGQKDFAVEAAHAFAPRTRAGLPHVVLAQAGTGVGKTLGYLS
PASVWSEASGGTVWVSTYTKALQRQLRKESRRAWPETRPDGSQPVVVRKGRENYLCLLNL
EDALQGGFAGRAAILAHLVGRWAAYTQDGDMIGGDLPGWLGTLFHKRGIAALTDQRGECV
YAGCPHYRKCFIERATRASVNADLVIGNHALVMINAARGRDVASRPTRIVFDEGHHVFDA
ADSTFAAELSGTEMIELRRWVIGPEKKSRGRRRGLAARLADVASYDDEGDKAILTALSAA
EALPSDGWLQRINDGEPSGPLEELLAAVRATVYARDESGGQEAGYGLETEAAGLEGPFVE
ASQAARLALSELRRPLIQLGLRLEALLEDGPDWLDGQGRARIEGARHSLTWRIDLLVAWE
NLLERLGGPADPEYVDWLALARSEAREFDIGIHRHWLDPMKPFAKVVLEPAHGVIMTSAT
LRDGDSWDRAIARSGAPHIEVSPRLSLSPSPFDYAAQAEVLIVRDVPRGDIAALAAAYGR
LIEASGGGVLGLFTAIRRLRAVHGRIADRLARGGLPVYAQHVDPIDTGTLVDIFRDDPGA
SLLGTDALRDGVDVPGHSLRTVIMEQVPWPRPTILHRARRMAGGGSAYDDSIIRARLAQA
FGRLIRSKEDRGHFIVLSSAFPSRLLDAFPEGTPISRISLDEALQRVAGHVSGNPIATPA
DRTDRG
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgtccgcgccccgacaccctgctcttcacgccagccacagcggctgctggctgcacgac
ggacagggaagcgcgcgcgccctttccaaggggcaggccgtcaccgcagtcgccgatgct
ccgcacctgatcctcaatgccccgctgctcgccacgcggcttggctatcccgatcttgcc
gggctcgacctgctcgaactctacgccttcattcacccagcccgctttgtcgtgcccacg
cccaagggtctcgccgatgcgctgggcctgccgcggcccgacgctgacagcgaagtgccc
gaacttctccagcgcgccgcgatgcgcctcctggaaacctgcgaacagcccgactgggcc
gagcgcgagggggcctggacctcgctgcaatcgctggtgaagatgcgctggccctgggcc
aagcttctcgccccgcgcctcgccaagccgcagaaggccgagcgctggatcttcacgcgc
cttccggagtgggaggaatcgcctgagccgccccagccgcgccagctcaacatccccgat
ggcgccgttctcgaccgcctcgcccacctcaccgggcaaggcgccgaggagcgcgcgggc
cagaaggacttcgcggtcgaggccgcccacgcctttgcgccgcgcacccgcgcaggcctt
ccccatgtcgttctggcccaggcgggtacaggcgtcggcaagacgctgggttacctctcg
cctgcgtcggtctggagcgaggccagcggcggcacagtctgggtctcgacctacaccaag
gcgctgcagcgccagctgcgcaaggaaagccgccgcgcctggcccgagacgcggcccgat
ggctcgcagccggtcgtcgtgcgcaaggggcgcgagaattacctgtgcctcctgaacctt
gaagatgccctccagggcggcttcgccggacgggccgccatcctcgcccacctggtgggg
cgctgggctgcctacacgcaggacggcgacatgatcggcggggatctgcccggctggctc
ggcaccctgttccacaaacgcggcatcgcggcattgaccgaccagcgtggcgaatgcgtc
tatgcaggctgcccgcactaccgcaaatgcttcatcgagcgcgccacacgcgccagcgtc
aacgcggaccttgtcattggaaaccacgcgctggtgatgatcaatgcggcgcgtggccgc
gatgtcgcctcgcgcccgacccgcatcgtcttcgacgaaggccatcacgtcttcgacgcg
gccgattcgaccttcgctgccgagctttcgggcaccgagatgatcgagctgcggcgctgg
gtgatcggcccagagaagaaatcgcgcggacgccgccgcggcctcgcggcccgccttgcc
gatgtcgccagttacgacgacgaaggcgacaaggcgatcctgaccgccctttccgccgcc
gaagccctgccgtccgacggttggctgcagcgcatcaacgacggcgagccctccggtccc
ctggaagagctgctcgcagccgttcgcgccaccgtctacgcgcgcgatgagagcggcggg
caggaagccgggtatggcctcgaaaccgaagccgccgggctcgaagggcccttcgtcgag
gcatcgcaggccgcacgccttgccctttcggagctgcgccgtccgctgatccagctcggc
cttcgtctcgaggccctgctcgaggacgggccggactggcttgacggccagggccgcgcg
cgcatcgagggcgcacgccattcgctgacctggcgcatcgacctgctggtcgcctgggag
aacctactcgagcgcctcggcggtccggccgaccccgaatatgtcgactggctcgccctt
gcccgttccgaggcgcgcgaattcgacatcggcatccaccgccactggctcgatccgatg
aagcctttcgccaaggtcgtgctcgaacctgcgcacggggtcatcatgacgtctgccacc
ttgcgcgacggtgacagctgggatcgcgccatcgcgcgctcgggcgcgccgcatatcgag
gtaagcccgcgcctttcgctcagccccagcccgttcgactatgccgcgcaggccgaagtc
ctgatcgtgcgcgatgtcccgcgcggcgacattgccgcgctcgccgccgcctacggccgc
ctgattgaggcttcgggcgggggcgtgcttggcctgttcaccgcgatccgccgtcttcgt
gccgttcatggacgtatcgcggaccggctcgcgcggggtggccttccggtctacgcccag
cacgtcgatcccatcgacacgggcacgctggtcgatatctttcgcgatgatccgggcgcc
tcgctgctcggcacggacgcgctgcgcgacggcgtggacgttcccggccactcacttcgc
accgtcatcatggagcaggtcccctggccccggcccacgatcctgcaccgcgcgcggcgt
atggcaggcggcggctcggcgtacgacgacagcatcatccgggcccgcctcgcgcaggca
ttcgggcgccttatccgcagcaaggaggatcgcgggcacttcatcgtgctgtcctcggcc
tttccctcgcgcctgctcgacgccttccccgaaggcacccccatctcgcgaatttcgctc
gacgaggctttacagcgcgtcgccggtcatgtttcagggaatccgatcgcgaccccggcc
gaccggaccgatcgcggatga

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