Novosphingobium decolorationis: HT578_03460
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Entry
HT578_03460 CDS
T07993
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ndr03019
]
HT578_03460 (rapZ)
Messenger RNA biogenesis [BR:
ndr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HT578_03460 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_22
cobW
AAA_30
T2SSE
CoaE
TsaE
AAA_16
ZSWIM1-3_C
Rad17
dNK
Motif
Other DBs
NCBI-ProteinID:
QVM82887
LinkDB
All DBs
Position
762609..763601
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AA seq
330 aa
AA seq
DB search
MTATPEPTPEASAHGAHDTGTDPALPQRQSVLLVTGMLGAGKTTVLRVLEDLGWEIIDNF
PIRLLEGLLDVPGEAQSDLPTPLAIGFDSRTRGFDPERVIAQVKTLSERPDIALTTLFLD
CQSAELERRYNETRRRHALAADAPVATGIQAERDLLTPLRRWAEVLIDTSEFTSNDLQRV
IRERFAESATEGTTLTISSFGFARGMPPLADLVFDMRFLDNPHWDPDLRPQTGQDAAVGD
FIRKDPAFSEAFSRIRDLLLLLLPRYKAQGKSYVHIAFGCTGGKHRSVFTAEQMASALRH
SGFSPTLLHRNLGSRAADLLEGEPRRDDKH
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaacacctgagcccacccccgaggccagcgcacacggcgcccacgacacgggg
actgacccggcgctgccccagcgtcaatcggtcctgcttgtcaccggcatgcttggtgcc
ggaaaaaccacggttctcagggtcttggaggaccttggctgggaaatcatcgacaacttc
ccgatccgcctgctcgaaggtctgctcgatgttccgggcgaggcgcagagcgatcttccc
acgccccttgccatcggcttcgattcgcgcacccgcggcttcgatcccgagcgtgtgatc
gcccaggtaaaaacccttagtgagcggccagacatcgcgctgacgacgctcttcctcgat
tgccagagcgccgagctcgagcgccgctacaacgaaacccgccgccgccatgcgctcgcc
gcggacgcccctgtcgcgaccggtatccaggccgagcgcgacctgctcacgccgctgcgg
cgctgggccgaagtgctgatcgacaccagcgaattcaccagcaacgatctccagcgcgtg
attcgcgagagattcgccgaaagcgcgaccgagggtaccaccctcaccatttcaagtttc
gggttcgcgcgcgggatgcccccgctcgccgacctggtcttcgatatgcgcttcctcgac
aatccccattgggacccggaccttcgcccacagaccgggcaggacgcggccgttggcgat
ttcatccgcaaggatccggccttttccgaggcattcagccggatacgcgacctgctcctg
ctcttgctgccgcgctacaaggcgcaaggcaaaagctatgtccatatcgccttcgggtgt
accggcgggaaacaccgttcggtttttactgcggaacagatggcatcggccttgcgccac
tcgggattttcccccacattgctgcaccgcaacctgggctcacgagcagccgatcttctt
gaaggagagccgcggcgtgatgacaagcactaa
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