Novosphingobium decolorationis: HT578_04500
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Entry
HT578_04500 CDS
T07993
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ndr01011
]
HT578_04500
Enzymes [BR:
ndr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HT578_04500
Peptidoglycan biosynthesis and degradation proteins [BR:
ndr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HT578_04500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
VMAP-M15
Motif
Other DBs
NCBI-ProteinID:
QVM83069
LinkDB
All DBs
Position
984144..986120
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AA seq
658 aa
AA seq
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MSSMLRVSSLLATVALGALPSPSMAQETAQEAREWDLARARQSQDIDIRVHQSIDDWRRV
VASDRLDFGTYASFLLTYPGYPQEEKIRGYAEKAMLRESPEPRTVLSFFDRFPPLGNEAA
GRYATALAAVRRDDALDKARAAWRGGDLTENAETTLLSLYRNQFTPADHDARMDALLWQG
QTPQAERQISFVSPARRAVFMERLALLQGTAPGTLGLDLPSDVTTDPGYAFNRVSQARRN
GDLPGAIAFLVDRPKLRGPVPEPEKWVRELLTAARGTGPSNAVAIAASIDDAFAPGTDIS
RLSYRLRDDYTSLVWLGGTKALWSLGDARRAAPLFYRYGAAAQTPGTRSKGFYWAGRALS
KAGDESGARRYFEMAAQYPHYFYGQLSLERLGRPLPDLDTRSSAQPTPAQRAEFNARPIT
KAVRDVARSAEWRTGVQFFREIAGQAETEVEHKLVADLAREIGRRDLAVILGQSAHGEGH
DAFGAVAFPTMPIPSGADWTMAHALTRQESQFAQNAISHAGARGLMQLMPATARETAGKL
GLSYSVDKLTADPVYNIQLGTGFFARMMDYYGGARPLAIAAYNAGPGNVNKWLRANGDPR
KGEIEWVDWIEQIPFYETKNYVMRVLENATVYDAMYPDKADYRGPNLTSKLMGKRTPG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtatgttgcgagtttcttctctcctggcgacggttgcgctcggcgcactcccc
tcgccctccatggcccaggaaacggcccaggaggcccgggaatgggaccttgcgcgggcc
cgccagtcccaggacatcgacattcgcgtccaccaatcaatcgacgattggcgccgcgtg
gtggccagcgaccgactcgatttcgggacttacgccagcttcctgctcacctatccgggc
tatccgcaggaagagaagattcgcggctacgccgaaaaggcgatgctgcgcgaatcgcct
gagccgcgcaccgtgctctccttctttgaccgcttccctccgctcggcaacgaagcggct
ggccgttatgccaccgcgctcgccgccgtgcgccgcgacgacgctctcgacaaggcccgc
gcggcctggcgcggcggcgacctgaccgagaacgcggaaaccaccctgctctccctctac
cggaaccagtttaccccggccgatcacgacgcgcgcatggatgcgctcctgtggcagggc
cagacaccgcaggccgaacggcagatctcgttcgtctcccctgcgcgccgcgccgttttc
atggagcgcctcgccctgctccagggaaccgcgcccggcacgctcggcctggatcttccc
agcgatgtcacgaccgatcccggctacgccttcaaccgcgtctcgcaggcgcgtcgcaac
ggcgacctgcccggcgcgatcgcctttctcgtcgatcgccccaagctgcgcgggccggtg
cccgagcccgaaaaatgggtgcgcgaacttctgaccgccgcacgcggcaccggcccgtcg
aacgcggtcgccatcgccgcctcgatcgacgatgccttcgcgcccggaaccgacatctcc
cgtctctcctaccgcctgcgcgacgattacacttcgctggtatggctgggcggaaccaag
gcgctgtggtcgctgggcgatgcgcgccgcgccgcgccgctgttctaccgatacggtgca
gccgcgcagacacccggcacccgctccaagggcttctactgggccggacgcgcgctctcc
aaggcgggcgatgaaagcggcgcacgccgctacttcgagatggccgcgcagtacccgcac
tatttctacggccagctctcgctcgaacgccttggccgtccgctgcccgatctcgatacc
cgctccagcgcgcagcccacaccggcccagcgcgccgaattcaacgccaggcccatcacc
aaggccgtgcgtgacgtggcccgcagcgccgagtggcgcaccggcgtccagttcttccgc
gagatcgcaggccaggccgagaccgaggtcgagcacaagctcgtcgccgaccttgcccgc
gagatcggccggcgcgacctggccgtgatcctgggccagagcgcgcacggcgaaggccac
gatgccttcggcgccgtcgccttcccgaccatgccaatcccttcgggcgcggactggacc
atggcccacgccctcacccggcaggaaagccagtttgcccagaacgcaatcagccatgcc
ggcgcacgcgggttgatgcagctcatgcccgcaaccgcgcgcgaaaccgcgggcaagctg
ggcctttcctattcggtcgacaagctgacggccgatccggtctacaacatccagctgggc
accggcttcttcgcgcgcatgatggattactacggcggcgcccgtccgctggcgattgcc
gcgtacaacgcagggccgggcaacgtgaacaagtggctgcgcgccaacggcgatccacgc
aagggcgagatcgaatgggtcgactggatcgagcagatcccgttctacgagaccaagaac
tacgtcatgcgcgtgctcgagaacgcgaccgtctacgatgccatgtacccggacaaggcg
gactatcggggccccaacctgacctcgaagctcatgggcaagcgtacgccgggttaa
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