Novosphingobium decolorationis: HT578_05305
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Entry
HT578_05305 CDS
T07993
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr03030
DNA replication
ndr03430
Mismatch repair
ndr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HT578_05305 (ssb)
03430 Mismatch repair
HT578_05305 (ssb)
03440 Homologous recombination
HT578_05305 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndr03032
]
HT578_05305 (ssb)
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_05305 (ssb)
03029 Mitochondrial biogenesis [BR:
ndr03029
]
HT578_05305 (ssb)
DNA replication proteins [BR:
ndr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HT578_05305 (ssb)
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HT578_05305 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
HT578_05305 (ssb)
Mitochondrial biogenesis [BR:
ndr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
HT578_05305 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
DUF3127
Motif
Other DBs
NCBI-ProteinID:
QVM83203
UniProt:
A0ABX8E2Q8
LinkDB
All DBs
Position
complement(1171027..1171644)
Genome browser
AA seq
205 aa
AA seq
DB search
MAGSVNKVILVGNLGADPEVKSFQNGGRVANLRIATSETWKDRQTGERRERTEWHQVVLQ
SDGLVGVAERFLRKGSKVYIEGQLRTRKWQDRDGNDRYTTEISVAGVGGVLTMLDSAGGG
GGQRGGGGMGGSSGGDSWGGGGGSSSGGGDWGRSGGSSGGGDSWGGGSSGGGASSGGSDW
GRSGGSSSSSSGGGFGDDLDDDIPF
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagcgtcaacaaggtcatcctcgtcggcaacctcggggccgaccccgaagtg
aagtcgttccagaacggcgggcgcgtggcgaacctgcgcatcgcgacctcggaaacctgg
aaggaccgccagaccggtgagcgccgcgagcgcaccgagtggcaccaggtcgtgctccag
tccgacggcctcgttggcgtcgccgagcgtttcctgcgcaagggctcgaaggtctacatc
gaaggccagctgcgcacccgcaagtggcaggaccgcgacggcaatgaccgttacaccacc
gagatctcggtggctggcgtgggcggcgtgctgaccatgctcgacagcgcgggcggcggc
ggcggccagcgcggcggtggcggcatgggcggcagctcgggcggtgacagctggggcggc
ggtggcggctcgtcttcgggcggcggcgactggggccgttcgggcggttcgtcgggtggc
ggcgacagctggggcggcggttcctcgggtggcggcgcgtcctcgggcggcagcgactgg
ggccgcagcggcggttcgtcctcgtcctcctcgggcggcggcttcggcgacgatctggac
gacgatattccgttctga
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integrated database retrieval system
