Novosphingobium decolorationis: HT578_06215
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Entry
HT578_06215 CDS
T07993
Name
(GenBank) type II and III secretion system protein family protein
KO
K02280
pilus assembly protein CpaC
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HT578_06215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ndr02044
]
HT578_06215
02035 Bacterial motility proteins [BR:
ndr02035
]
HT578_06215
Secretion system [BR:
ndr02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
HT578_06215
Bacterial motility proteins [BR:
ndr02035
]
Pilus system
Pilus assembly proteins
HT578_06215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
Fervidolysin_SD2
BON
DUF2259
Motif
Other DBs
NCBI-ProteinID:
QVM86066
LinkDB
All DBs
Position
1381663..1383252
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AA seq
529 aa
AA seq
DB search
MKRRLFPSLLRATCLVAPLATLGALAPLAPAAAQSISTPAQDIALSIGNGQLVTVPGTMA
DVFVANEAIADVQVKSTNQLYVFGKGGGTTTVYASNRAGQVIWSANVRVGSNFDSVDSML
RLAMPEAKITVSSMGTNTFLLTGTIKSPEDAAEAERLVQAYVGKEANVISRLRTATPLQV
NLQVRIAEVSRSLVKTIGSRLTTMDSTGGFKFGIGQNAPIDNQGVFAPGRTLGVGNIPTD
SVIDPITGELTQIPGTAVNQLGTGTTLGMAGRLFGLDILGALDAGETVGLVTSLAQPNLT
ALSGETAEFLAGGEFPIPISQGLGATSIEYKNYGVSLSYTPTVLANGRISLRVRPEVSDL
SSQGSVTLNGFEVPSLTTRRTETTVELGSGQSFMIAGLLSNNTSNTITKMPGAGDIPILG
SLFRSTGYNRGETELVIVITPYLVKPVDPSQIVLPTDGYSAPNELQRLLGNQQSDGSGPT
QRPGPSRGAAPAPAPGVDVGALDATPQAQAQPRTRTAADDTAKPGFTLK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccgcctcttcccctccctgctccgcgccacctgcctggtcgccccgctggcc
accctcggcgcgctcgcaccgctcgccccggccgcggcccagtcgatctcgacgcccgcg
caggacatcgccctctcgatcggcaacggccagctcgtcaccgttccgggcacgatggcc
gacgtcttcgtcgccaacgaggcgatcgccgacgtccaggtcaagtcgaccaaccagctc
tacgtcttcggcaagggcggcgggacgaccacggtctacgccagcaaccgcgcaggccag
gtcatctggtcggccaacgtgcgcgtcggctcgaatttcgacagcgtcgattcgatgctg
cgcctggccatgcccgaggcgaagatcacggtctcctcgatgggcaccaacaccttcctc
ctcaccggcacgatcaagtcgcccgaggacgccgccgaggccgaacgcctggtccaggcc
tacgtcggcaaggaggccaacgtcatcagccgcctgcgcacggccacgcccttgcaggtc
aacctgcaggtgcgcatcgccgaagtcagccgctcgctggtcaagaccatcggctcgcgc
ctgacgacgatggattcaaccggcggcttcaagttcggcatcggccagaacgcgccgatc
gacaaccagggcgtcttcgcgccgggccgcaccctcggggtcggcaacatcccgaccgac
agcgtgatcgacccgatcacgggcgaactcacgcagattccgggcaccgccgtcaaccag
ctgggcaccggcaccacgctgggcatggccggacgcctgttcgggctcgacattctgggc
gcgctcgacgcaggtgagaccgtgggtctcgtcaccagcctcgcgcagcccaacctgacc
gcgctttcgggcgagaccgccgagttcctcgcgggcggcgaattcccgatcccgatcagc
cagggcctgggcgccacctcgatcgagtacaagaactacggcgtcagcctcagctacacg
cccaccgtgctcgccaacgggcgcatctcgctgcgcgtgcgccccgaggtctcggacctc
tcgagccagggttcggtcacgctcaacggcttcgaggtcccttcgctgaccacgcggcgc
accgaaaccacggtcgaactgggctcgggccagagcttcatgatcgcgggcctgctcagc
aacaacacctcgaacacgatcaccaagatgcccggcgccggtgatatcccgatcctgggc
tcgctgttccgctcgaccggctacaaccgcggcgagaccgagcttgtcatcgtgatcacg
ccgtatctggtgaagccggtcgatccctcgcagatcgtcctgccgaccgatggctacagc
gcgcccaacgaactgcagcgcctgctcggcaaccagcagagcgacggttcgggccccacc
cagcgcccgggtccctcgcgcggcgccgcgcccgcccccgcgcctggcgtcgacgtcggc
gcgctggacgcaacgccccaggcacaggcgcagccgcgcacgcgcacggccgccgacgac
accgccaagcccggcttcaccctcaagtga
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