Novosphingobium decolorationis: HT578_06440
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Entry
HT578_06440 CDS
T07993
Symbol
gatB
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00970
Aminoacyl-tRNA biosynthesis
ndr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HT578_06440 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ndr03029
]
HT578_06440 (gatB)
Enzymes [BR:
ndr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
HT578_06440 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
HT578_06440 (gatB)
Mitochondrial biogenesis [BR:
ndr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HT578_06440 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
TPIP1
Motif
Other DBs
NCBI-ProteinID:
QVM86072
LinkDB
All DBs
Position
complement(1441349..1442851)
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AA seq
500 aa
AA seq
DB search
MDMSTYRIQGATGEWEVVIGLEVHAQVSSQAKLFSGAATEFGAEPNTQVALIDAAMPGML
PVPNKECIRQAVRTGMAINAQINKYSRFDRKNYFYADLPQGYQISQLYHPIVGEGQLVIE
ADEKAGIPEDKVIGIERIHVEQDAGKLMHDQHPTMSYVDLNRVGVALMEIVSRPDMTSPA
EAGAYLSKLRTILRYVGSCDGNMDQGSMRADVNVSVRKPGEELGTRTETKNVNSVRFVMQ
AIEHEAMRQVDVLEAGGKIVQETRLFDPNTGSTRSMRSKEDAHDYRYFPDPDLLPLILED
DFLEDCRNSLPELPDAKKARYENELGLSAYNAQVLTADVDTARWFERLLAETAKASGKAP
AEVSKQAANWLISELFGALNKLGTSLEESPVTPEKGGDLLALIAKGTISGSAAKQVLEIM
LDTGDEAEAIVEREGLKQESDTGAIEAEVDKILAANADKVEQYKGGKVALFGFFVGQTMK
AMKGKGNPQVVNEILKAKLG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
attgatatgagcacctatcgtattcagggcgcaacgggcgagtgggaggtcgtgatcggc
cttgaagtccatgcgcaggtctcctcgcaggccaagctgttctcgggcgcggcgaccgaa
ttcggcgctgaacccaacacgcaggtcgcgctgatcgacgcggcgatgcccggcatgctg
cccgtgcccaacaaggagtgcatccgccaggcggtgcgcaccggcatggcgatcaacgcg
cagatcaacaagtactcgcgtttcgaccgcaagaactacttctacgccgaccttccgcag
ggctaccagatcagccagctctaccacccgatcgtgggtgaggggcagcttgtcatcgag
gccgacgaaaaggccgggatccccgaagacaaggtcatcggcatcgagcgcatccacgtc
gagcaggacgcaggcaagctgatgcacgatcagcacccgacgatgtcctacgtcgacctc
aaccgcgtgggcgtggcgctgatggaaatcgtcagccgcccggacatgacctcgcccgcc
gaggccggggcctacctctcgaagctgcgcacgatcctgcgctacgtcggctcgtgcgat
ggcaacatggaccagggctcgatgcgcgcggacgtcaacgtctcggtgcgcaagccgggc
gaggaactgggcacccgtaccgagaccaagaacgtgaactcggtgcgcttcgtcatgcag
gcgatcgagcacgaggcgatgcgccaggtcgacgtgctcgaagcgggcggcaagatcgtg
caggaaacgcgcctgttcgatcccaacaccggctcgacccgctcgatgcgttcgaaggaa
gatgcgcacgattaccgctacttccccgatcccgacctcttgccgctgatcctcgaagac
gacttcctcgaggattgccgcaactcgctgcccgagctgcccgatgcgaagaaggcgcgc
tacgagaacgagctgggtctttcggcctacaacgcacaggtgctgaccgccgacgtcgac
accgccaggtggttcgagcgcctgctggccgaaaccgccaaggcttcgggcaaggcaccc
gctgaggtctcgaagcaggccgccaactggctgatctcggaactgttcggcgcgctcaac
aagctgggcacgagccttgaggaatcgcccgtaacccctgaaaagggcggcgatcttctg
gcgctcatcgccaagggcacgatctcgggctcggccgccaagcaggtcctcgagatcatg
ctcgatactggcgacgaagccgaagccatcgtcgagcgcgaaggcctcaagcaggagtcc
gacaccggcgccatcgaggccgaggtcgacaagatcctcgccgccaacgccgacaaggtc
gaacagtacaagggcggcaaggtcgcgctcttcggcttcttcgtcggccagacgatgaag
gccatgaagggcaagggcaacccgcaggtcgtgaacgagatcctgaaagccaagctcggc
tga
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