Novosphingobium decolorationis: HT578_07175
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Entry
HT578_07175 CDS
T07993
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ndr03009
]
HT578_07175
Enzymes [BR:
ndr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
HT578_07175
Ribosome biogenesis [BR:
ndr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HT578_07175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QVM83500
LinkDB
All DBs
Position
complement(1609901..1610443)
Genome browser
AA seq
180 aa
AA seq
DB search
MARLILFNKPFDVLSQFTDARSASPRATLSDYIDVPGVYPAGRLDRDSEGLLLLTDDGWL
QSRISDPKYKTEKTYLVQVEREPDEAALAALRKGVMLKDGMTRPADVRRIDEPDLWARTP
PVRFRKSVPDCWLELTIREGRNRQVRRMTAAVGHPTLRLVRWRIGDWSLEGIANGEWREA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcctcatcctgttcaacaagcccttcgacgtgctctcgcagttcaccgatgcc
cgctcggccagtccgcgcgcgacgctgtcggactatatcgacgtgcccggtgtctatcct
gccgggcggctcgaccgcgacagcgaggggctcctgctcctgaccgacgacgggtggctg
cagtcgcgcatctcggacccgaagtacaagaccgagaagacctatctcgtccaggtcgag
cgcgagcctgacgaggccgcgctcgccgcgctgcgcaagggcgtgatgctgaaggacggg
atgacccgcccggccgacgtgcgccggatcgacgagccggacctgtgggcgcgcaccccg
cctgtgcgctttcgcaagtcggtgcccgactgctggctggagctcactatccgtgagggc
cgcaaccggcaggtgcggcgcatgaccgcggctgtcggccacccgacgctgcggctggtg
cgctggcgcatcggggactggagcctcgagggcatcgccaacggcgaatggcgcgaggcg
tga
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integrated database retrieval system
