Novosphingobium decolorationis: HT578_08195
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Entry
HT578_08195 CDS
T07993
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00730
Thiamine metabolism
ndr01100
Metabolic pathways
ndr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
HT578_08195 (thiC)
Enzymes [BR:
ndr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
HT578_08195 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QVM83678
LinkDB
All DBs
Position
complement(1816873..1818747)
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AA seq
624 aa
AA seq
DB search
MADINSKLEIGVTTGPIRGSRKIHVPAQTNPAIRVAMREIDLEPSSGEPPVRVYDTSGPY
TDPDAAIDISAGLAALRRDWQFARGDVEEYAPREVKPEDNGKTGPDRSGGVPAFPTALRK
PLRAKAGGNISQMHYARRGIITPEMEYVAERENLGRARLAEYTRSGESFGASIPDYVTPE
FVRDEVARGRAIIPSNVNHPECEPMAIGRNFLVKVNANIGNSAVASDVASEVDKMVWSIR
WGADTVMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGVAEDLTWDVFRDTLIE
QAEQGVDYFTIHAGVRLPYVPLAAKRLTGIVSRGGSIMAKWCLAHHKESFLYEHFDEITE
IMKAYDIAYSLGDGLRPGSIYDANDEAQFAELYTLGELTKKAWAQDVQVMIEGPGHVPMH
KIKENMEKQLESCGEAPFYTLGPLTTDIAPGYDHITSGIGAAQIGWYGTAMLCYVTPKEH
LGLPDRDDVKVGVVTYKLAAHAADLAKGHPAAQVRDDALSKARFEFRWRDQFNLSLDPDT
AELYHDQTLPAEGAKTAHFCSMCGPRFCSMKISQEVRDFAAKQNQPSTGFIAAQDAEKGM
EEMSKVFKDSGSQLYMGQGEREHD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcaacagcaaactggaaatcggtgtgaccaccgggcccatccggggctca
cgcaagatccatgttcccgcgcagaccaacccggcgatccgggtcgcgatgcgcgagatc
gatcttgaaccttccagtggcgaaccgccggtgcgggtctacgacacttccgggccttac
accgaccctgacgcggcgatcgacatctcggcgggcctcgccgcgctgcgccgcgactgg
cagttcgcccgcggcgatgtggaagagtacgcgccgcgcgaggtaaagcccgaggacaac
ggcaagaccgggccggatcgttccggcggcgtgcccgcgttcccgaccgcgctcagaaag
ccgctgcgggccaaggcggggggcaacatctcgcagatgcactacgcaaggcgcggcatc
atcacccccgagatggaatatgtcgccgagcgcgagaaccttggccgggcgcggctggcc
gaatacacccgctcgggcgagagcttcggcgcgtcgatcccggactatgtgacgcctgaa
ttcgtgcgcgacgaggtcgcccgcggccgcgcgatcatccccagcaacgtcaaccatccc
gagtgcgagccgatggcgatcgggcgcaattttctcgtcaaggtcaacgccaacatcggc
aattcggcggtggcctcggacgttgccagcgaagtcgacaagatggtctggtcgatccgc
tggggcgcggacaccgtgatggacctctcgacgggccgcaacattcacgacacgcgcgag
tggatcatccgcaattcgcctgttcccatcgggacggtgccgatctaccaggcgctcgag
aaggtcgggggcgtcgccgaagacctgacctgggacgtgttccgcgacacgctgatcgag
caggccgagcagggcgtcgactacttcacgatccatgccggcgtgcgcctgccctatgtg
ccgctcgccgccaaacgcctgaccggcatcgtcagccgcggcggttcgatcatggccaag
tggtgcctcgcccaccacaaggagagcttcctctacgagcacttcgacgagatcaccgag
atcatgaaggcttacgatatcgcctactcgctgggcgatggcctgcgcccgggctcgatc
tacgacgccaacgatgaggcccagttcgccgaactttatacgctgggcgaactgaccaaa
aaggcgtgggcgcaggacgttcaggtcatgatcgaggggcccggccatgtgccgatgcac
aagatcaaggagaacatggaaaagcagctggaaagctgcggcgaagccccgttctacacc
ctggggccgctcaccaccgacatcgcgcccggctatgaccacatcaccagcggtatcggc
gcggcgcagatcggctggtacggcaccgcgatgctctgctatgtcacgcccaaggaacac
cttggcctgcccgaccgcgacgacgtcaaggtgggcgtcgtcacctacaagctcgccgct
cacgccgccgatcttgccaagggtcacccggccgcgcaggtgcgcgacgatgcgctgtcc
aaggcgcgcttcgagttccgttggcgcgaccagttcaacctgtcgctcgatcccgacacg
gccgaactctaccatgaccagacgctgcccgccgaaggcgccaagaccgcgcatttctgc
tcgatgtgcggacccaggttctgctcgatgaagatcagccaggaagtgcgcgacttcgca
gccaagcagaaccagccttcgaccggcttcatcgctgcccaagacgccgaaaaaggcatg
gaggagatgagcaaggtgttcaaggactccggctcgcagctctacatggggcagggcgag
cgcgaacacgattga
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