Novosphingobium decolorationis: HT578_08445
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Entry
HT578_08445 CDS
T07993
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr02020
Two-component system
ndr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HT578_08445
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HT578_08445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ndr03000
]
HT578_08445
Transcription factors [BR:
ndr03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
HT578_08445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR
HTH_36
HVO_A0261_N
MarR_2
HTH_IclR
HTH_Cmi2_C
GntR
GvpL_GvpF
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
QVM83723
UniProt:
A0ABX8E459
LinkDB
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Position
1871356..1872009
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AA seq
217 aa
AA seq
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MTEDEKIDAICAIFRCGADSARLLLPVFSTRKVASRQVLASQGMPCRQCWIVIEGAIRVD
TIGLDGQLQQLSHYGPGEFLGSYPEESIGRAEISAANRSVLLGADSPRLAEMIEADVQLA
SGMARLLARQLDRALDRMVMRTTYTAAGRVYAELMALADSSSVIAPPPKVTNLALAANTT
RETASRAINELIRRGIVSRDETRMVIQSPRMIAELIY
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgacggaggacgagaagatcgacgccatctgcgcgatttttcgctgcggcgcggattcg
gcccgcctcctgcttcccgtcttctcaacccgcaaggtcgccagccgtcaggtcctcgcc
agccagggcatgccctgccggcaatgctggatcgtgatcgagggggcgatacgcgtcgac
acgatcgggctcgacgggcaattgcagcaattgtcccactacggccccggcgaatttctg
ggaagctaccccgaggaaagcatcggacgcgccgaaatcagcgcagcgaaccgctcggtc
ctgctcggcgccgactctccccgacttgcggaaatgatcgaagccgatgtgcaattggcc
tcgggaatggcgcggctcctcgcccgccagctcgatcgggcgctcgaccgcatggtcatg
cgcacgacctacaccgcagcgggccgcgtctatgccgaactgatggcgctggcggactcc
tcgagtgtgattgccccgccgcccaaggtcaccaacctggcccttgccgccaacaccacg
cgcgagaccgcatcacgcgcgatcaacgagttgatccggcgcggcatcgtgtcgcgcgac
gagacccggatggtcatccagtcgccgcgcatgatcgccgaacttatctactga
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