Novosphingobium decolorationis: HT578_08825
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Entry
HT578_08825 CDS
T07993
Name
(GenBank) LysR family transcriptional regulator
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ndr03000
]
HT578_08825
Transcription factors [BR:
ndr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HT578_08825
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SSDB
Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QVM83791
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Position
1939598..1940539
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AA seq
313 aa
AA seq
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MDLRLLRYFVAVADEGNFNRAAERLHIAQPPLSRAIQQLEAHVGATLLDRSSRPLQLTKV
GRLLHSQALQVLARIEDVEAMVRAAATSERRRLVIGFVASTIYARLPELIREFRKVAKNV
ELVMVESTTLDQLAALKDGRIDVGFGRIRFDDPAVQRVILRHEKLVAAFSPDHPMASGSG
PVSLSDLAQEPQIIYPRQPRPSYADQVLSLWRDYGIEPRIAHEARELQIAIGLVAAEEGI
AIVPESVRRARSHDVVYRELAETATSPIIMSHRPGDHSPELALMIATIARKYRDWGYDVP
TALDAHEAAIASG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcgcctccttcgctacttcgtcgcagtcgccgacgaaggcaatttcaaccgc
gcggccgagcggctgcacatcgcccagccgcccctttcccgcgcgatccagcaacttgag
gcgcatgtcggggcaaccctgctcgaccgttcgagccgccccctccagctgaccaaggtc
ggccgcctgctccattcgcaggcgctccaggtgctcgcgcggatcgaggacgtggaagcg
atggtgcgcgcggccgcgaccagcgagcggcggcgccttgtcatcggcttcgtcgcctcc
accatctatgcgcgcctgcccgagctcatccgcgaattccgcaaggtcgccaagaacgtc
gaactggtcatggtcgagagcaccacgctcgaccagctggccgcgcttaaggacgggcgc
atcgatgtgggcttcgggcgcatccgtttcgatgatccggcggtgcagcgcgtgatcctg
cgccacgagaagcttgtcgccgccttctcgcccgaccaccccatggcgagcgggtccggg
ccggtgtcgctgagcgacctcgcgcaggagccgcagatcatctacccgcgccagccccgc
cccagctatgccgaccaggtcctctcgctctggcgcgactacgggatcgagccaaggatc
gcgcacgaggcgcgcgaactgcagatcgccatcggccttgtcgcggccgaggaaggcatc
gccatcgtgcccgaatcggtgcgccgcgcgcgcagccacgacgtcgtctaccgcgagctt
gccgagaccgcgacttcgcccatcatcatgagccaccgccccggcgaccactcgcccgaa
ctggcgctgatgattgccacgatcgcgcgcaaataccgcgactggggctacgacgttccc
accgcgctcgacgcgcacgaggccgcaatcgcgagcggttaa
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