Novosphingobium decolorationis: HT578_09705
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Entry
HT578_09705 CDS
T07993
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ndr03000
]
HT578_09705
Transcription factors [BR:
ndr03000
]
Prokaryotic type
Helix-turn-helix
IclR family
HT578_09705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR
GAF_2
MarR_2
HTH_27
TrmB
HTH_45
GAF
Motif
Other DBs
NCBI-ProteinID:
QVM83932
LinkDB
All DBs
Position
2136067..2136846
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AA seq
259 aa
AA seq
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MDNGVPIRAVSRTLSVLRTINHEREVSLTDLVRIENLPYPTMFRIVQTLVHEGLIERDAS
GKRYRATALVHTLSSGYDDSALRSRAQPHMSALTREVGWPLLLSVRVGSRMVIRASTHHE
TTLTFHNWEAGSAMPMEGSATGLAWLAYLPEDHARDLVNWGSDYHTGGEAADADRQETMF
EALARIRHEGYAWRPSLFGDENKTSSISVPVLDGERILAVLTLTYFSAAMKSDVARERYV
QPLRETAAHIAHDVTPNCP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
gtggacaacggggttcccatccgggcggtcagccgcacgctctcggtgctgcgcacgatc
aaccatgagcgcgaagtctcgctcaccgacctcgtccgcatcgagaacctgccctacccc
acgatgttccgcatcgtgcagacgctggtccacgaaggactgatcgagcgtgacgccagc
ggcaagcgctaccgggcgaccgcgctcgtccacacgctgtcgagcgggtacgacgacagc
gccctgcgctcgcgcgcgcagccacacatgagcgcgctgacccgcgaggtgggctggccg
ctgctgctgtcggtgcgggtcggctcgcgcatggtcattcgcgcctcgacccaccacgag
accacgctcaccttccacaactgggaagcgggttcggccatgccgatggagggaagcgcg
acgggccttgcctggctggcctatctgcccgaggaccatgcccgcgacctggtgaactgg
ggcagcgactaccacaccggcggcgaagcggcggatgcggaccgccaggagaccatgttc
gaggcactcgcccgcattcggcacgagggctacgcctggcgcccctcgctgttcggcgat
gagaacaagacctcctcgatctcggtgccggtgctcgatggcgagcgcatcctcgcggtt
ctcacgctgacctacttctccgccgcgatgaagtccgatgtcgcgcgggaacgctatgtg
cagccactcagggaaaccgccgcccacatcgcgcacgacgtcacgccgaattgcccctga
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