KEGG   Novosphingobium decolorationis: HT578_10140
Entry
HT578_10140       CDS       T07993                                 
Name
(GenBank) response regulator transcription factor
  KO
K14987  two-component system, LuxR family, response regulator FixJ
Organism
ndr  Novosphingobium decolorationis
Pathway
ndr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ndr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HT578_10140
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:ndr02022]
    HT578_10140
Two-component system [BR:ndr02022]
 LuxR family
  FixL-FixJ (nitrogen fixation)
   HT578_10140
SSDB
Motif
Pfam: Response_reg GerE Sigma70_r4_2 HTH_23 Sigma70_ECF HTH_38 DUF6362 Yop-YscD_ppl_2nd
Other DBs
NCBI-ProteinID: QVM84004
LinkDB
Position
2231851..2232474
AA seq 207 aa
MGDRRVIHLVDDEESIRKAASFALKTAGYDVVTYASGVEFLKEAKSAAVGCVILDVRMPE
MDGLEIQAAMAARGVNMPVIVLTGHGDVSVAVQAMKGGAVDFLEKPFEKAALLGAVSRAF
ARLDDVDLRTLETSEAGVRVAALTPREREVLEGLANGLPNKTIAYDLGCSSRTVEVHRAS
LMAKLEVRNLSEALRIAFAAGMGRKPK
NT seq 624 nt   +upstreamnt  +downstreamnt
atgggggatagacgcgtcatccatctggtcgacgacgaggagagcatccgcaaggcggcg
agctttgcgctcaagaccgcgggctacgacgtcgtgacctatgcctcgggcgtggagttt
ctcaaggaggcgaagtcggcggccgtcggctgcgtcatcctcgacgtgcgcatgcccgag
atggacggtctcgagattcaggccgccatggcagcacgcggggtcaatatgccggtcatc
gtcctgaccggccatggcgacgtgtcggttgcggtgcaggccatgaaaggcggcgcggtc
gactttctcgagaagcccttcgagaaagccgccctgctcggcgccgtcagccgcgcgttc
gcgcgtctcgacgatgtcgaccttcgcactctggaaacctctgaagccggcgtgcgggtc
gctgcactgacgccccgggagcgtgaagtgctggaagggctggcgaacggcctgcccaat
aagacgatcgcctatgacctgggctgttcatcgcgaacggtcgaggtccatcgcgcgagc
ctgatggccaagctcgaggtccgcaatttgtccgaagccctgcggatcgcctttgccgcg
ggcatgggccgcaagccgaagtga

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