Novosphingobium decolorationis: HT578_11410
Help
Entry
HT578_11410 CDS
T07993
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ndr03016
]
HT578_11410 (truB)
Enzymes [BR:
ndr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HT578_11410 (truB)
Transfer RNA biogenesis [BR:
ndr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HT578_11410 (truB)
Prokaryotic type
HT578_11410 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QVM84215
LinkDB
All DBs
Position
complement(2477394..2478311)
Genome browser
AA seq
305 aa
AA seq
DB search
MPHGWIILDKPVELGSTQAVAAVKRNLREAGFNVKLKGGVKVGHGGTLDPLASGVLPIAL
GEATKLTGRMLDADKTYLFTLRFGEETDTLDAEGKVIATSDVLPSAEELAVVLPQFTGPI
TQVPPAYSALKVDGKRAYDLARAGEEVTLKSREVTIHALEIHGFDASDGVTLQAQVSKGT
YIRSLARDIAHALGSCGTVTMLRRIKAGPFDLSGAISLDKLNEVGKGAPLEQLLLPLEAG
LDDIPAIDLDPEQARAVRQGRVLTGMPQDDGLYWARLETIPVALVELSHGEVRVVRGFNL
TDVAE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgccccatggctggatcattctcgacaagccggtggagctgggctccacgcaggccgtc
gccgcggtcaagcgcaacttgcgcgaggcgggcttcaacgtgaagctcaagggcggggtc
aaggtcggccatggcggcacgctcgatccgctggcctccggcgttcttcccattgcgctg
ggcgaggcgaccaagctgacgggccggatgctcgatgcggacaagacctacctcttcacc
ctgcgcttcggcgaggagaccgacaccctcgatgccgagggcaaggtgatcgcgacgagc
gatgtcttgcccagcgccgaggagctggcggtggtcctgccgcagttcacaggccccatc
acccaggtcccgcccgcctattccgcgctcaaggtcgacggcaagcgcgcctatgatctg
gcgcgcgcgggcgaggaagtcacccttaagtcgcgcgaggtgacgatccatgcccttgag
atccatggcttcgatgccagtgacggggtgaccttgcaggcgcaggtctccaaggggacc
tatatccgcagcctcgcgcgggacatcgcgcacgcgctgggaagctgcggcacggtgacg
atgctgcgccggatcaaggccgggcccttcgacctctcgggggcgatttcgctggacaaa
ttgaacgaagtcggtaagggcgcgcctcttgagcagttactcttgccgctggaggcgggg
ctggacgacatcccggccatcgacctcgacccggagcaggcaagggcggtccgacagggc
cgcgttctgaccgggatgccccaggatgacgggctctactgggcacggctggaaaccatt
ccggtcgcgctggtggagctttcacacggcgaagtccgcgtggtccgggggttcaacctc
acagatgtcgcggagtga
DBGET
integrated database retrieval system
