Novosphingobium decolorationis: HT578_11880
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Entry
HT578_11880 CDS
T07993
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00300
Lysine biosynthesis
ndr00470
D-Amino acid metabolism
ndr01100
Metabolic pathways
ndr01110
Biosynthesis of secondary metabolites
ndr01120
Microbial metabolism in diverse environments
ndr01230
Biosynthesis of amino acids
Module
ndr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HT578_11880 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HT578_11880 (lysA)
Enzymes [BR:
ndr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HT578_11880 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QVM84296
UniProt:
A0ABX8E7V7
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All DBs
Position
complement(2565860..2567119)
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AA seq
419 aa
AA seq
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MDHFQLIDGQLCAEQVPLADIARDVGTPVYVYSRATFERHARVFREALSGLPSVHIAFAV
KSNPNLAVLRLLSKEGYGADVVSEGEMNRALAAGMPAEDIVFSGVGKSKRELTAAVKAGI
GQFNLESEEEGVELAAIASELGATATCALRVNPDVDARTHEKISTGKAENKFGVSYDRAA
GIYARLSALEGLNMRGLAVHIGSQISDLEPSRQAFVKMGALMEELRAQGLSVTHMDLGGG
LGVPYKGNESLPTPADYGAMVVEVTKGWDVTVMFEPGRVISGNAGVLVSEVIRVKEGTSA
PWIVVDAAMNDLARPAMYDAWHDFAAVKPTGETFTANVVGPICESSDTFAKNREVDVVKA
GDLVVFRTAGAYGATMANTYNSRALVPEVMVDGDAWALVAGRIEPETILAAESVPDFLV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaccattttcagctgatcgacggccagctttgcgccgagcaggtgccgctcgccgac
atcgcccgcgacgtcggcacccccgtctacgtctactcgcgcgcgaccttcgagcgccac
gcccgcgtctttcgcgaggcgctctcgggcctgccgagtgtgcacatcgcgttcgcggtg
aagtcgaacccgaacctggccgtgctgcgcctgctgtcgaaggaaggctatggcgcggac
gtggtctcggaaggcgagatgaaccgcgcgctggccgccggaatgccggctgaagacatc
gtcttctcgggcgtgggcaagtcgaagcgcgagctgaccgccgcggtgaaggccgggatc
ggccagttcaacctcgagagcgaggaagagggcgtcgaattggcggccatcgcctccgaa
ctcggcgccacggccacctgcgcgctgcgcgtcaatccggacgtcgatgcgcgcacccac
gagaagatctcgaccggcaaggccgagaacaagtttggcgtctcctatgaccgcgccgcc
gggatctacgcgcgcctctccgcgctcgagggcctcaacatgcgcgggcttgccgtccac
atcggcagccagatcagcgacctcgaaccctcgcgccaggctttcgtgaagatgggcgcg
ctgatggaggagctgcgcgcgcagggcctttcggtcacccacatggacctgggcggaggt
ctcggcgttccctacaagggcaacgagagcctgcccacgcccgccgattacggcgcgatg
gtggtcgaggtgacgaagggctgggacgtgaccgtcatgttcgagccgggccgcgtgatc
tcgggcaatgcgggcgtgctcgtctccgaggtgatccgcgtcaaggaggggacctccgcg
ccctggatcgtcgttgatgcggcgatgaacgaccttgcccgtccggcgatgtacgatgcc
tggcacgactttgccgcggtcaagccgactggtgagaccttcacggccaatgtcgtgggt
ccgatctgcgagagctcggacacctttgccaagaaccgcgaggtcgacgtggtcaaggcg
ggcgatctcgtcgtcttccgtaccgcgggcgcctatggcgcgacgatggccaacacctac
aacagccgcgcgctggtgcccgaagtcatggtcgatggcgatgcctgggcgctggttgca
ggtcggatcgagcccgagacgatcctcgcggccgagagcgtgccggacttcctcgtctga
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