Novosphingobium decolorationis: HT578_12160
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Entry
HT578_12160 CDS
T07993
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndr03032
]
HT578_12160
03036 Chromosome and associated proteins [BR:
ndr03036
]
HT578_12160
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_12160
DNA replication proteins [BR:
ndr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HT578_12160
Chromosome and associated proteins [BR:
ndr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HT578_12160
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HT578_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QVM84343
UniProt:
A0ABX8E6B9
LinkDB
All DBs
Position
2631079..2631360
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELLQALAKENPELRAEDVESALDTFFNEIGQRLADGGRVELRGFGAFSTRHRDSRV
GRNPRTGESVEVPEKRVPYFKPGKEMRARLNVT
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatcagatccgaactgctgcaggcactcgccaaggaaaatccagagctgcgcgccgaa
gacgtggaaagtgcgctcgacaccttcttcaacgagatcggccagcgcctcgccgacggt
ggacgcgtggaactgcgcggtttcggcgccttctcgacacgccaccgtgacagccgcgtg
ggccgcaacccgcgcaccggcgaaagcgtggaggtccccgaaaagcgggtgccctacttc
aagccgggcaaggaaatgcgcgcgcgcctcaacgtcacctga
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