Novosphingobium decolorationis: HT578_12180
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Entry
HT578_12180 CDS
T07993
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndr02000
]
HT578_12180
Transporters [BR:
ndr02000
]
Other transporters
Pores ion channels [TC:
1
]
HT578_12180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QVM84345
UniProt:
A0ABX8E582
LinkDB
All DBs
Position
2635653..2638694
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AA seq
1013 aa
AA seq
DB search
MTPTFRKAALRGATSLTAFALLCGTAQAQDATAPAPAASEGADDVIIVTGSITRNPAAAT
ASPVVSITSDDLEKRGIKTVADTLQTLTANNAGTIPASWSGNGFTTGATAPSLRGFNNAY
TLTLFDGMRTAYYPLADDGQRNIVDINSMPGSIVDRVDTLLDGASATYGSDAIAGVVNVI
SKRQIQGLHLDASMGVSQRGDGDEQRINGTYGYGDLDDQGFNIYANFEYQKNAAMDLSAR
KGPWSTADQSSICGGPTDGCLTNNVRNGIQADGGYGGIQSTIVPFVQPFTQDATGAYVAQ
GDYQMLNPSAGCGRLNALTLTPEQQQNATVVGTPSVVCQQDLTNDYEAYTARTKRIGGTL
RGTVRLNDLTEAFLMFNYYNVTTANRMAPSGWTGRTAAGGDRVTISQIYLPAYVCANGVG
TLSGEANNILSGTGCDASNGTLNPNNPFAAQSQSARLLGMPDMPRYTYTNAKTYRISGGV
DGSFGDGWDYMIGATASEVTLDVTNTGYINAQGLMDAVAQGTYNFMDPSANSAEAIQGVF
PDQHKRATSKLAQVMATLSKDVFELPGGMVNVAIQGQYRYESINNPSSNAPNDVNPADRY
YGINAIGVKGHRDVWSAAYEISVPIVDEFRVKADGSYDHYSTGQENFAPKFEAEFQPIDE
IKLRGTFTKGFRAPNLNESFQLPSTGYITSTINCSNAAFQSFCDAHASNPGYYEGGYSVG
ITSAGNPDLKSEKSTSYTFGAVIQPTRNITLTVDYWRTKIKNLITSVNPTDELYAAYYGN
NGQVNMPGITVTQGAPDPENLGALPLIGEVGSSFQNANSMLGKGIDVSGSAYFGLTDTIT
WRTNATASYLIRLQQDIDGTINRFDGSLGGCNWTSCSGAPRFRASWQNTLDFADTTSVTL
TAYYTSGYSSTASDAGGTYKDCEASAAAGQLVTYPDSGRAVQCHGPSTFNLDGHAETKIA
DGKFTLYADVMNILDGKPKYDPNAAYGIYNFNAAWQGSLFMGRYFRIGAKVDF
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
gtgacacccactttccggaaggccgcgctgcgcggcgccaccagcctgaccgctttcgcc
ctgctgtgcggcaccgcccaggcccaggacgccaccgctccggctccggccgccagcgaa
ggcgccgacgatgtcatcatcgtcaccggctcgatcacccgcaacccggcggccgccacg
gcctcgccggtcgtctcgatcacctcggacgatcttgagaagcgcggcatcaagactgtc
gccgacacgctgcagacgctgaccgccaacaacgcgggcacgatccccgccagctggtcg
ggcaacggcttcaccacgggcgccaccgccccgtcgctgcgcggcttcaacaacgcctac
acgctgacgctgttcgacggcatgcgcaccgcctactacccgcttgcggacgacggccag
cgcaacatcgtcgacatcaactcgatgcccggttcgattgtcgaccgcgtcgacaccctg
ctcgacggcgcctcggcgacctacggctcggacgcgatcgcgggcgtggtcaacgtcatc
tccaagcgccagatccagggcctgcacctcgatgcctcgatgggcgtctcgcagcgcggc
gacggtgacgagcagcgcatcaacggcacgtatggctacggcgatctcgacgaccagggc
ttcaacatctacgcgaacttcgaataccagaagaacgccgcgatggatctctcggcccgc
aagggtccgtggagcacggccgaccagtcctcgatctgcggcggcccgaccgacggctgc
ctgaccaacaacgtgcgcaacggcatccaggccgacggcggctacggcggcatccagtcg
accatcgtgcccttcgtccagcctttcacgcaggacgccacgggcgcctacgtcgcgcaa
ggcgattaccagatgctcaacccgagcgcaggctgcggccgcctgaacgcgctcacgctg
acgccggagcagcagcagaacgccaccgttgtcggcaccccctcggtggtctgccagcag
gacctcaccaacgactacgaagcctacaccgcgcgcaccaagcgtatcggtggcacgctg
cgcggcacggtgcgcctgaacgacctcaccgaggcgttcctgatgttcaactactacaac
gtgaccaccgcgaaccgcatggccccctcgggctggaccggccgcaccgcggcgggtggc
gatcgcgtcacgatcagccagatctacctgcccgcctatgtctgcgcgaacggcgtgggc
acgctgtcgggcgaggccaacaacatcctgagcggcacgggctgcgatgccagcaacggc
acgctcaacccgaacaacccgtttgccgcgcagagccagtcggcccgcctgctcggcatg
cccgacatgccgcgctacacctacaccaacgccaagacctaccgcatctcgggcggcgtc
gacggctcgttcggtgacggttgggactacatgatcggcgcgaccgcttcggaagtcacg
ctggacgtcaccaacaccggctacatcaacgcccagggcctgatggacgcggtggcgcag
ggcacctacaacttcatggatccctcggccaactcggccgaagccatccagggcgtgttc
cccgaccagcacaagcgcgcgacctcgaagctggcgcaggtcatggcgaccctcagcaag
gacgtgttcgagctgccgggcggcatggtcaacgtggccatccagggccagtaccgctac
gagtcgatcaacaacccgagctcgaacgcccccaacgacgtcaacccggcggatcgctac
tatggcatcaacgccatcggcgtgaagggtcaccgcgacgtgtggtcggcggcttacgaa
atctcggttccgatcgtggacgaattccgcgtgaaggccgacggctcgtatgaccactac
tcgaccggccaggaaaacttcgcgcccaagttcgaggccgaattccagccgatcgacgag
atcaagctgcgcggcacgttcaccaagggcttccgcgccccgaacctgaacgaatcgttc
cagctgccttcgaccggctacatcacctcgacgatcaactgcagcaatgccgcgttccag
tcgttctgtgacgcacacgccagcaaccccggctactacgagggcggctacagcgtgggc
atcacttcggccggcaacccggacctgaagtccgagaagtcgacctcgtacaccttcggc
gcggtgatccagccgacccgcaacatcacgctgacggtcgactactggcgcaccaagatc
aagaacctgatcacctcggtgaaccccaccgatgagctctacgccgcgtactacggcaac
aacggccaggtgaacatgcccggcatcaccgtgacgcagggtgcgcccgatccggagaac
ctgggtgcacttccgctgatcggcgaagtcggcagctcgttccagaacgcgaactcgatg
ctcggcaagggtatcgacgtctcgggctcggcctacttcgggctcaccgacacgatcacc
tggcgcaccaacgccacggcctcgtacctgatccgtctgcagcaggacatcgacggcacg
atcaaccgcttcgacggttcgctgggtggctgcaactggacctcgtgctcgggcgccccg
cgcttccgcgcttcgtggcagaacacgctggacttcgccgacaccaccagcgtgacgctc
accgcgtactacaccagcggctattcgagcaccgcgtcggatgccggcggcacctacaag
gactgcgaagccagcgcggcggccggtcagctcgtgacctacccggacagcggccgtgcc
gtgcagtgccatggccccagcaccttcaacctcgacggccacgccgagacgaagatcgcc
gacggcaagttcacgctctacgcggatgtcatgaacatcctcgacggcaagcccaagtac
gacccgaacgctgcctacggcatctacaacttcaacgccgcgtggcagggctcgctcttc
atgggccgctacttccgcatcggcgcgaaggtggacttctaa
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