Novosphingobium decolorationis: HT578_12255
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Entry
HT578_12255 CDS
T07993
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HT578_12255 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_12255 (mutS)
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HT578_12255 (mutS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
QVM84357
UniProt:
A0ABX8E598
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All DBs
Position
complement(2649589..2652204)
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AA seq
871 aa
AA seq
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MSSGATPMMAQYLALREEAGECLLFYRMGDFFELFFEDAKIASQVLDIALTTRGEHNGTP
IPMCGVPVHSAESYLARLIKAGCRVAIAEQTETPAEAKKRGGSKALVARDIVRFVTAGTL
TEEALLEPRRANVLAAACEVRGAIGLAACDISTGQMVLEECAPDRFLASLARLGARELVV
QDGWELAPEDAIGRSGHEFSSEGGEERLKGIHGVSTLDGFGAFTRPMLAAAGGLIAYLDH
VGRGALPLLLPPEARSGEATLAMDEATRASLEILESAQGSRKGSLIDAVDRCVTGAGARQ
LAEDLSAPLTDRPEISARLELVGWLHEDPMLREDLRAALRALPDVGRALGRVVAGRGSPR
DLGQLRDGLAGAHSIGGRLAGRADLPVLLDSLLPALGGHVAGWGAMVEHFTRALVSAPPT
ERGQGGFIAEGYDASLDELRVTSGNARKAIAALEAKYREDTGVTALKIKHNNVLGYFIEV
PSRHADTLMQAESGFTHRQTMAGAMRFNALALHEEASRITEAGAHALAAEEAHFEALVEE
AVAARQVIAATAAALARIDVAAGQAERAAEGGWARPEVVEGLSLEIEGGRHPVVEAALKA
QNERFVANDCRLASHDRLWLIGGPNMGGKSTFLRQNALIVLLAQAGGFVPADAARIGLVD
RLFSRVGASDNLARGRSTFMVEMVETAAILSQATERSFVILDEVGRGTSTYDGLALAWAV
AEAVHETNRCRCLFATHYHEMARLAETCEALSLHHVRAREWKGELVLLHELAEGAADRSY
GLAVARLAGVPPKVISRAKSVLEKLEKGRAETGGLAAGLGELPLFAAAEEAREEACDSLR
EKLRDMDVDALAPRDALEILYDLKREAGTED
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgagttccggcgcaacacccatgatggcccagtatctcgcgcttcgcgaggaggctggc
gaatgcttgctgttctaccgtatgggggacttcttcgagcttttcttcgaagatgcaaaa
atcgcaagccaagttctcgatatcgcactcaccacgcgcggtgagcacaacggaaccccg
atcccgatgtgcggcgtgccggtccattcggccgaaagctaccttgcccggctgatcaag
gcgggctgccgcgtggccatcgccgagcagaccgagacgcccgccgaagcgaagaagcgc
ggaggctccaaggcccttgtcgcgcgcgatatcgtgcgcttcgtgacggcagggacgctg
accgaggaagcactcctcgaaccgcgccgggcgaacgtcctggccgcggcctgcgaggtg
cgcggcgcgatcggtcttgccgcctgcgatatctcgaccgggcagatggtgcttgaggaa
tgtgcacctgatcgctttcttgcaagccttgcacgtctgggcgcgcgcgaactggtcgtg
caggacggctgggagctggcgcccgaggatgcaatcgggcgttcgggccatgaattctcc
tccgagggcggcgaggagcgcctgaagggcatccacggggtctccacgctcgacggcttt
ggggcctttacccgcccgatgctggccgccgccggtggtctcattgcctatctcgaccat
gtcgggcgcggtgcgctgcccctgctgcttccgcccgaggcgcgttcgggcgaggcgacg
ctggcaatggacgaggccacgcgcgcgagcctggaaatcctcgaatccgcgcaaggttcg
cgcaagggcagcctgatcgacgcggtcgaccgctgcgtgaccggcgcgggcgcacgccag
ctggctgaggacctttccgcgccgctgaccgaccggcctgagatttcggcacgtctcgaa
ctggtcggctggctgcatgaggacccgatgctgcgcgaggacctgcgcgcggcgctgcgc
gcgctgccggacgtgggccgtgcgctgggccgcgtggtcgcggggcgcggatcgccgcgc
gatctgggccagctgcgcgatggtctggccggagcgcattccatcggcgggcgccttgct
ggccgcgcggacctgccggtgctgctcgacagcctgctccccgcactgggcggccatgtc
gcgggctggggcgcaatggtggagcatttcacccgcgcgctcgtctccgcgccgccgacc
gaacgcgggcagggcggcttcatcgccgaaggctacgacgccagccttgatgaactgcgc
gtcacctcgggcaacgcgcgcaaggcgattgctgcgctcgaggcgaagtaccgcgaggat
acgggcgttaccgcgctcaagatcaagcacaacaacgtgctgggctacttcatcgaggtc
ccctcgcgccacgccgacacgctgatgcaggccgagagcggctttacccaccgccagacg
atggccggcgccatgcgcttcaacgcgctggcgctgcacgaggaggcgagccgcatcacc
gaggcgggcgcccatgcgctcgcggccgaagaggcgcatttcgaggcgctggtcgaggag
gccgtcgctgcacgccaagtgatcgcggccaccgcggccgcgctcgcgcgcattgacgtt
gccgctgggcaggcagagcgcgccgcagaagggggctgggcgcgacccgaagtggtcgag
gggctctcgctggaaatcgagggcggccgccatccggtggtggaagcggccctcaaggcg
cagaacgagcgtttcgtcgccaacgactgccgtctcgccagccacgaccggctctggctg
atcggcgggcccaacatgggtggtaagtcgacgttcctgcgccagaacgcgctcatcgtc
ctgctcgcgcaggcgggcggattcgtgccggcggacgccgcgcggatcggtctggtggac
cgcctgttcagccgcgtgggggcctcggacaacctggcgcgcgggcgctcgactttcatg
gtcgagatggtcgagaccgccgcgatcctctcgcaggcgaccgagcgcagcttcgtgatt
ctggacgaggtcgggcgcggtacatccacttacgatggcctcgcgctggcctgggcggtc
gccgaggcggtccacgagaccaaccgctgccgctgccttttcgcgacccactatcacgag
atggcgcgccttgccgaaacctgcgaggcgctttcgctccaccatgtgcgcgcgcgcgaa
tggaagggcgaactggtgctcctgcacgaactggccgaaggcgcggcggatcgcagctat
ggccttgccgtcgcgcgccttgcgggtgttccccccaaggtcatcagccgggccaagtcg
gtgctcgaaaagctcgaaaagggccgcgcggaaacgggtggtctggccgctggccttggc
gagcttccgctgttcgccgccgccgaagaagctcgcgaagaggcctgcgacagcttgcgc
gaaaagctgcgcgacatggatgtcgacgcgcttgccccgcgcgacgcgctggaaattctc
tatgatctcaagcgcgaggcgggaaccgaggattaa
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