Novosphingobium decolorationis: HT578_12355
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Entry
HT578_12355 CDS
T07993
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr03030
DNA replication
ndr03430
Mismatch repair
ndr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HT578_12355
03430 Mismatch repair
HT578_12355
03440 Homologous recombination
HT578_12355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ndr03032
]
HT578_12355
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_12355
Enzymes [BR:
ndr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HT578_12355
DNA replication proteins [BR:
ndr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HT578_12355
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HT578_12355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QVM84377
LinkDB
All DBs
Position
complement(2678284..2679339)
Genome browser
AA seq
351 aa
AA seq
DB search
MKATQKDFASVAARVAREARLFFLCGPDESGASDAAAKIVSLLDDPGERIEMSGAELRRD
PVRLGDEARSTSLFGGTRHIYVRAQGDEAHDAVKTLIENEVEGCPVLIVATGATDKSRTA
KLLSGRGDALVGMFYPPDLASVTATVRTLANGAGLKMGSEVAQRIARAAGLDTRLARSEV
EKLALYLDAVPEAPQAVTMEALDAIGASTEDDAFGPLVDTILGGKRELLASELKRMHDLQ
INPVGLLLALERRVAQLAALNAQLGTNGDVGALLEAEAKARRVFWKDKPALAQQLRVWRG
PRLDRLVSRLVALHQSLLSNSQDSELLLADGLVRIARMAIGSTKQRASRTV
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggccacccagaaggacttcgcctcggtcgcggcccgggtcgcgcgtgaggcccgg
ctgttcttcctgtgtgggcccgacgaatcgggcgcgagcgatgcggccgcgaagatcgtc
tcgcttctggacgacccgggcgaacgtatcgagatgagcggagcggaactgcgccgcgat
ccggtgcgcctgggtgacgaggcccgctcgacctcgctgttcggcggcacccgccacatc
tacgtgcgcgcgcagggcgacgaagcacacgatgcggtcaagaccctgatcgagaacgag
gtcgagggctgcccggtcctgatcgtggcgaccggcgcgaccgacaagtcgcgcacggcc
aagctgctttccgggcgcggcgatgcgctggtgggcatgttctatccgcccgatctcgcc
tcggtgaccgccacggtgcgcacgctggccaacggggcggggctcaagatggggagcgag
gttgcccagcgcattgcccgtgcggcagggctcgacacgcggcttgcgcgttccgaggtc
gagaagctggcgctctatctggatgccgtgcccgaggctccgcaggcggtgacgatggag
gccctcgatgcgatcggcgcctcgaccgaggacgatgccttcggtccgctcgtcgatacg
atcctgggggggaagcgcgagcttctcgcctccgaactcaagcgcatgcacgacctgcag
atcaatccggtgggactgttgctggccttggagcggcgtgtggctcaactggccgctctc
aatgcccaattgggaacgaacggcgacgtcggcgctttactcgaagccgaagccaaggcg
cgtcgggtattctggaaagacaaaccggccctggcgcagcaattgcgggtctggcgcggc
ccgcgtctcgaccgtctcgtgtcgcgtcttgttgcactgcaccagagtctcctgtccaat
agtcaggattcggagctcttgttggccgatggtctcgtgcgaattgctcgaatggcgata
ggatctacaaaacaacgcgcaagcagaaccgtctaa
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