Novosphingobium decolorationis: HT578_14375
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Entry
HT578_14375 CDS
T07993
Name
(GenBank) LysR family transcriptional regulator
KO
K19338
LysR family transcriptional regulator, nitrogen assimilation regulatory protein
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ndr03000
]
HT578_14375
Transcription factors [BR:
ndr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HT578_14375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
SBP_bac_3
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QVM84708
LinkDB
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Position
3095049..3095975
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AA seq
308 aa
AA seq
DB search
MDTRKFDYFISVAETGSFSQAAVSLRLSQPLLSRQVRNLEEELGLPLFYRNGRGATLTEA
GRCLLKNARNVREAIDATYSELSQLRNLLAGTAAIGMPTSVGRALSVPLAQHFNSELPHV
KLHLVEGLSSDIAERVQQGRLDVAILYSPIRSQNMLCDPVVEEQLVLVSKRGSGPAGPVS
FEDLTQLPLIMTGPHQQLRRDLEKAARAREAELQIAVEIDALGSILELVEEGLGHAILPP
AALLRDEGMERFDVVRIDSDLVRRTLYVATGPQRSDAVPSHKLASLVKEKLLGLTGRNTW
QIVESRSV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggacacgcgcaagttcgattacttcatttccgtcgcggaaacgggcagcttttcgcaa
gccgctgtcagtctgcgcctgtcacaacccctcctcagccgccaggtgcgcaaccttgaa
gaggaactgggcctgccgctgttctaccgcaacgggcgcggcgcgaccctgaccgaggcg
gggcgctgcctgctcaagaacgcacgcaacgtgcgcgaggcgatcgatgcgacctacagc
gagctcagccagctgcgcaatcttctggccgggaccgccgcgatcggcatgcccaccagc
gtgggccgggcgctcagcgttccgctcgcccagcatttcaattccgagctgccccacgtg
aagctgcacctcgtcgaggggctgtccagcgacattgccgagcgcgtccagcaggggcgg
ctggacgtcgcgatcctctattcgccgatccgcagccagaacatgctgtgcgatccggtg
gtggaagagcagctggtgctggtcagcaagcggggcagcggcccggcggggcctgtctcc
ttcgaggatctgacccagcttcccctcatcatgacagggccccatcagcagctgcgccgc
gatctggagaaggccgctcgggcgcgcgaagccgagctccagatcgcggtcgagatcgac
gcgctgggatcgattctcgaactggtcgaggaggggctgggccatgcgatcctgccgccg
gctgcacttctgcgtgacgagggtatggagcgcttcgatgtcgtgcgcatcgacagcgat
cttgtccgccgcacgctttacgtggcgacggggccgcagcgttccgacgcggtgcccagt
cacaagctggcgagcctggtgaaggagaagctgctgggcctcaccggccgcaacacctgg
cagatcgtcgagagccgcagcgtgtaa
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