Novosphingobium decolorationis: HT578_14810
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Entry
HT578_14810 CDS
T07993
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_14810
Enzymes [BR:
ndr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HT578_14810
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HT578_14810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QVM84785
LinkDB
All DBs
Position
3203278..3204801
Genome browser
AA seq
507 aa
AA seq
DB search
MKTLVPVLGDQLSFDLSSLAGMEARDIVVLMMEVAEETTYVRHHKKKIAYILSAMRHHAQ
ALVEAGYTVDYVRLDDPEASDSFTGEIARAIARHDPERIVVTEPGEWRVAAMMESWQTLF
GLPVDIRADTRFLCSHAEFEDWAEGRRALTMEFFYREMRRKTGLLLDDGKPAGGQWNFDK
DNRQPADADLFMPRPRRFEPDAITREVLALVAERFADHPGSLEDFDYAVTAADAERQAAS
FFANALPDFGRYEDAMLRGQPFLWHSILSPYLNSGLLDPLDLCRRAEAEYRAGRAPINSV
EGYIRQILGWREYVRGIYWREGPKYVERNFLDHRRDLPAWFWTGETDMQCLREAIGQTLA
TGHAHHIQRLMVIGNFALLAGCDPRQVHEWYLQVYVDAYEWVELPNTLGMSQFGDGGLLG
SKPYVASGAYINRMSDYCGTCAYNVKERVGPVACPFNALYWHFLERHRDKLGDNHRMALT
YRNWDRQDEDSREGILAQARAFLAGCA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactcgtgcccgtgctgggcgatcagctctcgttcgacctgtcctcgcttgcg
gggatggaggccagggacatcgtcgtcctgatgatggaggtcgcggaggagacgacctac
gtgcgccatcacaagaagaagatcgcctatatcctttcagccatgcgccatcacgcgcag
gcgctggtcgaggcaggctatacggtcgattacgtacgcctcgacgatccggaggccagt
gacagcttcacaggcgagatcgcccgcgccattgcgcgccatgacccggagcgcatcgtc
gtgaccgagccgggggaatggcgcgtggcggccatgatggaaagctggcagaccctgttc
ggcctgcccgtcgatatccgtgcggacacgcgcttcctgtgctcgcacgctgagttcgag
gactgggcggagggccgccgcgccttgacgatggaattcttctaccgcgagatgcgccgc
aagacagggctcctgctggacgacggcaagcctgcgggcgggcagtggaatttcgacaag
gacaaccgccagccggccgacgccgacctcttcatgccccggccgcggcgtttcgagccc
gatgccatcacccgcgaggtgctggccctcgtcgccgagaggttcgcggaccatcccgga
tcgctggaggatttcgactacgcggtcaccgccgccgatgccgagcggcaggcggcgagc
ttctttgccaacgccttgcccgattttggccgctacgaggacgccatgctgcggggccag
ccgttcctgtggcactccatcctctcgccctacctcaattccgggctgctcgacccgctc
gacctgtgccgccgcgcggaggccgagtaccgggcggggcgggcgccgatcaattcggtc
gagggctatatccggcagatcctgggctggcgcgaatacgtacgcggcatctactggcgc
gaggggcctaagtacgtggagcgcaatttcctcgaccaccgccgggacctgcccgcctgg
ttctggacgggcgagacggacatgcagtgcctgcgcgaggcgatcggccagacccttgcg
acggggcacgcgcatcacatccagcggctcatggtgatcgggaacttcgcgcttctggcc
ggctgcgatcccagacaggtccacgaatggtacctgcaggtctatgtcgatgcctacgaa
tgggtcgaactgcccaacacgctgggcatgagccagttcggcgatggcggccttctgggt
tccaagccctatgtcgcctcgggggcctacataaaccgcatgtcggactactgcgggacc
tgcgcctacaacgtgaaggaacgggtgggccccgtggcatgccccttcaacgccctgtac
tggcatttcctcgagcgtcaccgcgacaagctgggcgacaatcaccgcatggcgctgacc
taccgcaactgggaccggcaggacgaggacagccgggagggtattctcgcgcaggcgcgc
gcgttcctcgcaggttgcgcatga
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