KEGG   Novosphingobium decolorationis: HT578_16325
Entry
HT578_16325       CDS       T07993                                 
Symbol
trbJ
Name
(GenBank) P-type conjugative transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
ndr  Novosphingobium decolorationis
Pathway
ndr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:ndr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HT578_16325 (trbJ)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ndr02044]
    HT578_16325 (trbJ)
Secretion system [BR:ndr02044]
 Type IV secretion system
  Trb secretion system protein
   HT578_16325 (trbJ)
SSDB
Motif
Pfam: DUF948 DUF3535 Hypoth_Ymh LXG COG3_N AIM5 BBS2_N DUF4141 Polo_box_2 COG4_N Tweety
Other DBs
NCBI-ProteinID: QVM85050
UniProt: A0ABX8E7A0
LinkDB
Position
complement(3536834..3537598)
AA seq 254 aa
MKLRRYRAARFAAALLAAPAALAPVFATPAQAIIVYDPTNYAQNVLQAARALQQINNQIT
SLQNEAQSLINQARNLTSLPFSSLQQLQQSVQRTQQLLSQAQGIAYNVQNIDRAFQTNYA
AGSASMSASDQQLVAQAKERWNNTVSGLQDAMRVQAGVVGNIDTNRTQMSALVGQSQGAT
GALQATQAGNQLLALQAQQLADLTAVVSANGRAQALAEAERSAAAEQGREQRRRFLTPRT
GYQPGNAQMFPGSN
NT seq 765 nt   +upstreamnt  +downstreamnt
atgaaattgcgccgttaccgcgcagcgcgattcgctgctgcactgctcgcggctcctgcc
gcgctcgcgcctgttttcgcgacgcctgcccaagccatcatcgtatacgacccaaccaac
tacgcgcaaaacgtgctgcaggcggctcgcgcgttgcagcagatcaacaaccagatcact
tctctgcagaacgaggcgcagtccctgatcaatcaggcgcgcaaccttacgagcctgccg
ttctcctcccttcagcagcttcagcagtctgtccagcgcacccagcagctcctcagccag
gcgcagggcatcgcgtacaacgtccagaatatcgaccgggcgttccagacaaattacgcc
gccggcagcgcttcgatgagcgcctccgatcagcagctcgtcgcccaggcgaaggaacgc
tggaacaacacggtctcaggcctgcaggacgcgatgcgggtccaggcgggcgtcgtcggc
aatatcgacaccaaccgcacgcagatgtcggcgctcgtcggtcagagccagggcgcgacg
ggcgccctgcaggcgacgcaggccggcaaccagcttctcgcgcttcaggcccagcagctc
gccgatctcaccgccgtcgtctccgccaatggccgcgcccaggcgctcgccgaggccgag
cggtcggccgccgctgaacagggccgcgagcagcgccgccggtttctcacgccgaggacc
ggctaccagcccggcaacgcgcagatgttcccaggcagcaactga

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