Novosphingobium decolorationis: HT578_16355
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Entry
HT578_16355 CDS
T07993
Name
(GenBank) conjugal transfer protein TraG
Organism
ndr
Novosphingobium decolorationis
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
QVM85056
LinkDB
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Position
complement(3542248..3544239)
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AA seq
663 aa
AA seq
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MSATKILWGQILTVFAIVLLTTWAATEWTAYRLGFQPQLGPPWFTLGDWAIYYPWSFFPW
WYFYDAYAPPIFVEGAYIAASGGFISIAVAIGMSVWRAREAKNAETFGSARWAHEGEVRG
AGLLGEDGVVLGKYDRAYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSAIVHDIKG
ENWTLTAGFRARHGRVLLFDPTNAKSAAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
KRNHWEKTSHALLVGAILHVLYAEEDKTLAGVAAFLSDPKRPIESTLAAMMKTAHLGESG
PHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTCRCDWRIADIVGAKQPT
SLYLVVPPSDIARTKPLIRLILNQIGRRLTEDLKAKGNRHRLLLMLDEFPALGRLDFFES
ALAFMAGYGLKAFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMRAMRNYAGHRLSPWLGHLMVSRSETARPLLTPGEIMQLPSADEIVMVAGTPPIRAKK
ARYYEDRRFNDRIMAPPAFTRPTQPGMDDWSRLPLPPRPASAVSPGVAVIEDGDEDPTGS
ERRRQPELERATPVEKKAPIENEFDGGFNDEADDDAARISRANQIMQGVARQVSLDPNDG
MEL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccaccaagatcctctggggccagatcctcacggtcttcgcgattgtcctgctg
accacctgggccgccacggagtggacagcctaccggctcggcttccagccccagctcgga
ccgccgtggttcacgctcggcgactgggccatctactatccgtggtccttctttccgtgg
tggtacttctacgacgcttacgccccgccgatcttcgtcgagggcgcctacatcgccgcg
tccggcggcttcatctcgatcgcggtcgcgatcggcatgtcggtgtggcgggcccgggag
gcgaagaacgccgagaccttcggctcggcgcgttgggcacatgaaggcgaggtgcgcggc
gccggtctgcttggcgaggacggcgtggtgctcggcaagtacgaccgcgcctatctccgg
catgatgggccggagcatgtcctgtgcttcgcgccgacccggtccggcaagggcgtcggt
ttggtcgtgccgtcgctgctgacctggccgggttcggcgatcgtccacgatatcaagggc
gagaactggacactgaccgccgggttccgcgcccgccatggccgggtgctgctgttcgac
ccgaccaacgcgaagtcggccgcctacaacccgttgctcgaggtgcgccgcggcgaatgg
gaggtccgcgacgtgcagaacatcgccgacatcctggtcgatccggagggcagcctcgaa
aaacggaaccattgggagaagaccagccacgcgctcctcgtgggcgcgatcctgcatgtc
ctctacgccgaggaggacaagacgctcgccggtgtcgccgccttcctctccgatccgaag
cggccgatcgagtccaccttggcggcgatgatgaagaccgctcaccttggcgaaagcggt
ccgcacccggtgatcgcgtccgccgcgcgcgagctgctgaacaagtccgacaacgaacga
tccggcgtgctctccaccgctatgtcattcctcggcctttatcgcgaccccgtcgtcgcc
gaggtgacgtgccgctgcgactggcgcatcgccgacatcgttggcgccaagcagccgacc
agcctttacctggtcgtgccgccgtcggacattgcccggaccaagccgctcattcgcctc
atcctcaaccagatcggccggcgtctgaccgaggatctcaaggccaagggcaaccggcat
cggctgctgctgatgctcgacgagtttccggctctcggccgactcgacttcttcgaatcc
gcgctcgccttcatggctggctacgggttgaaggcgttcctgatcgcgcagtccctgaac
cagatcgagaaggcctacgggcccaacaactcaatcctcgacaactgccacgtccgcgtc
agcttcgcgaccaacgacgaacggaccgctaagcgcgtctccgacgcactcgggaccgcg
accgagatgcgcgccatgcgcaactatgccggccatcgtctctcgccatggctcggtcac
ctgatggtgtcgcgctcggaaacggcgaggccgctgctcacgcccggcgagatcatgcag
ctcccgtccgccgacgagatcgtcatggtcgcgggcacgccgccgatccgcgcgaagaag
gcgcgctactacgaggatcgccgcttcaacgatcggatcatggcgccgccggcgttcacc
aggccgacgcagccgggaatggacgattggagccgtctaccacttccaccccggccggcg
agcgcggtgtcgccaggagtggctgtcatcgaggatggtgacgaagatccgaccggatcg
gaacgtcgccgccagccggagctggaacgcgccacgccggtcgagaagaaggcgccgatc
gagaacgagttcgacggcggattcaacgacgaggccgatgacgatgctgcccggatcagc
cgcgccaaccagatcatgcagggcgtggcgcgtcaggtctcgctcgacccgaacgacggc
atggagctgtga
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