Novosphingobium decolorationis: HT578_17375
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Entry
HT578_17375 CDS
T07993
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00061
Fatty acid biosynthesis
ndr00071
Fatty acid degradation
ndr01100
Metabolic pathways
ndr01212
Fatty acid metabolism
ndr02024
Quorum sensing
ndr04146
Peroxisome
Module
ndr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HT578_17375
00071 Fatty acid degradation
HT578_17375
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HT578_17375
09145 Cellular community - prokaryotes
02024 Quorum sensing
HT578_17375
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ndr01004
]
HT578_17375
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ndr04147
]
HT578_17375
Enzymes [BR:
ndr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HT578_17375
Lipid biosynthesis proteins [BR:
ndr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HT578_17375
Exosome [BR:
ndr04147
]
Exosomal proteins
Exosomal proteins of breast milk
HT578_17375
Exosomal proteins of breast cancer cells
HT578_17375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QVM85225
LinkDB
All DBs
Position
complement(3777136..3778845)
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AA seq
569 aa
AA seq
DB search
MTRAAQMGGMDRLAQTSSLATADEMPPIAPRLLTDLLDHAVEVHGDWNAVDFMGRKWTYE
EIGERAQRAARGFQDLGVVKGTRVGLCLPNTPYYVILYFAILRVGGVVVNFNPLYTEREM
AHLVEDSGCEILVTADLQVSMPKVADLLGKHQLKRVVVCSFADALPSLKRGAFLLFKRGD
IVPFPEHDLRFIAYDDLVARRVAPDPVARDPDDLAVLQYTGGTTGVPKGAMLTHANLTAN
SAQMLAHVGHMPETQERTLGVLPLFHVFALTTVLNYSIDTAAEMILLPRFEMKSFLKTAL
RTRPTQFFGVPTLYTALNGEETHGAFSSVRVCISGGAPLPLEVRHTFEERTGVRVVEGYG
LSEASPIITCNPLEGEVKDNSCGPAFPGTTIEIRDPDNLERLCAVGEKGEVCARGPQVMS
GYWNRPEESEKTFTHGALRTGDIGYVDEDGYLFLVDRIKDVILCGGYNVYPRIIEEAIYE
HPMVNEAAVIGIPHPYRGQAPKAFVALHPGDTLSDEELLEFLRERLNKIEMPSAIEFRDS
LPKTLVGKLSKKELVAEEKARRGETGDAA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgcggcgcagatgggcggcatggaccgcctggcacagacttcctccctcgct
acggcggacgagatgccccccatcgcgccgcgcctgctgaccgacctgctcgaccatgct
gtcgaggtccacggggactggaacgccgtggacttcatgggccgcaagtggacctacgag
gagatcggcgagcgcgcgcaacgtgcggcgcgcggctttcaggacctgggcgtcgtcaag
ggcacgcgggtcggcctgtgcctgcccaacacgccctattacgtgatcctctatttcgcg
atcctgcgcgtgggcggcgtcgtggtgaacttcaatccgctctacaccgagcgtgagatg
gcgcaccttgtcgaggattcgggctgcgagatccttgtcaccgccgacctgcaggtctcc
atgcccaaggtcgcagacctcctgggcaagcaccagctgaagcgcgtcgtcgtgtgctcg
tttgccgatgccctcccttcgctcaagcgcggcgcgttcctgctcttcaagcgcggcgac
atcgtgcccttccccgaacatgacctgcgcttcatcgcctacgacgatcttgtcgcgcgc
cgggtcgcgcccgatccggtcgcccgcgatcccgacgacctcgccgtgctgcaatacacc
ggcggcaccaccggcgtgcccaagggcgcgatgctcacccacgcgaaccttaccgccaat
tcggcgcagatgcttgcccacgtgggccacatgcccgagacgcaggagcgcacgctgggc
gtcctcccgctcttccacgtctttgccctgacaacggtgctcaactactccatcgacacc
gcggccgagatgatcctcctgccccgcttcgagatgaagtccttcctcaagaccgccctg
cgcaccaggccgacccagttcttcggggtgcccacgctctacaccgcattgaacggcgag
gagacgcacggtgccttctccagcgtgcgggtgtgcatttcgggcggcgcgccgctcccg
ctggaggtgcgccacaccttcgaggaacgcaccggcgtgcgcgtggtggaaggctacggc
ctgtccgaagccagcccgatcatcacctgcaacccgctcgagggtgaggtcaaggacaac
tcgtgcgggcccgcctttcccggcacgaccatcgaaattcgcgatcccgacaacctcgaa
cgcctgtgcgcggtcggcgagaagggcgaggtctgcgcgcgcggcccccaggtcatgtcg
ggttactggaaccgcccggaggaaagcgaaaagaccttcacccacggcgcgctgcgcacg
ggcgacatcggctatgtcgatgaggacggctacctgttcctcgtcgaccgcatcaaggac
gtgatcctgtgcggaggctacaatgtctacccgcgcatcatcgaggaggcgatctacgag
cacccgatggtgaacgaggccgccgtgatcggcatcccccacccctatcgcggacaggcc
cccaaggccttcgtcgcactccaccccggtgacaccctttcggatgaggaactgttggaa
ttcctgcgcgaacggcttaacaagatcgagatgccctccgcgatcgaatttcgagactcc
ctgcccaagacccttgtcggcaagctttccaagaaggagctcgtcgccgaggaaaaggcg
cgccgcggcgaaaccggggacgcggcgtga
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