Novosphingobium decolorationis: HT578_17380
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Entry
HT578_17380 CDS
T07993
Name
(GenBank) porin
KO
K06076
long-chain fatty acid transport protein
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ndr02000
]
HT578_17380
Transporters [BR:
ndr02000
]
Other transporters
Pores ion channels [TC:
1
]
HT578_17380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
Porin_4
Porin_2
OMP_b-brl
BBP2_2
Motif
Other DBs
NCBI-ProteinID:
QVM85226
LinkDB
All DBs
Position
complement(3778845..3780143)
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AA seq
432 aa
AA seq
DB search
MTRMTGRVALCTAVSLGALGAAGTAHAQGFYLQEQSVRAQGRAFSGEAADTGVESIWWNP
ASIAGMEGGEASLHASAILPRGKVRDENTLIVRPGTAPASVGGDPVAKDPINTGVLPSGA
IAYGFGKFAFGLAVSAPYNFTTDYSEDSWARYTADKTELRTIDIQPTVAVELAPGIHLGA
GLNVQHAKAELSNYLPNLSAALPDGHQRLKGDGWNTGWSVGAQMHRGPVSLGLAYKSAIK
HKLDGTLTNSGLLGPLAGQNMEVATSATFSTPWQAIGSVRYRATPELTLNFQAVRVGWSE
FDSIDLGAPINTSIPEGYRDIWSLAGGFDYALDPKLTVRGGIQYGQTPTRDGHRDARVPD
SDRLNFSAGASYAATRNLTVDFAASYISFEDAPIDRTTASYAGTPVQTPILVDGTLTDAS
ALVFSLGARMTF
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacacgaatgacggggcgggtcgccctttgcacggcggtatcgctgggcgctctgggc
gcagcgggcacggcccacgcgcaaggtttctatcttcaggagcagtcggtgcgcgcgcag
ggccgcgcgttttcgggcgaagccgccgatacgggcgtcgaatccatctggtggaacccg
gcttccattgccgggatggaaggcggcgaagcctccctccacgccagcgccatcctgccg
cgcggcaaggtgcgtgatgagaacaccctgatcgtgcgcccgggcaccgcgccggcctcc
gtcggcggcgatccggtcgccaaggacccgatcaacaccggcgttctgccgtccggcgcg
attgcctatggctttggcaagttcgccttcggccttgcggtcagcgccccctacaacttc
accaccgactattcggaagacagctgggcgcgctacaccgccgacaagaccgagctgcgc
accatcgacatccagccgaccgtcgcggtcgagctggcgccgggcattcacctgggcgcc
ggcctcaacgtccagcacgccaaggccgaactctcgaactacctgcccaacctgtccgcc
gcgcttcccgatgggcaccagcgcctcaagggcgatggctggaacacgggctggtcggtc
ggcgcccagatgcaccgcggccccgtctcgctcggcctcgcctacaagtcggcgatcaag
cacaagctcgacggtacgctcaccaattcgggactgctggggccgctggccgggcagaac
atggaagtggcgaccagcgcgactttctccacgccctggcaggcaatcggatcggtccgc
taccgcgcaacacccgagctcaccctcaacttccaggcggtgcgcgtgggctggagcgag
ttcgattcgattgatctgggcgcgcccatcaacacctcgatccccgaaggctaccgcgac
atctggagcctggcgggcggctttgattacgccctcgatcccaagctcaccgtgcgcggc
ggcatccagtacgggcagacgcccacgcgcgatggccaccgtgacgcgcgcgtgcccgac
agcgaccgcctgaacttctcggccggtgccagctacgcggccacgcgcaacctgacggtg
gacttcgcagcctcgtacatcagcttcgaggacgcgccgatcgaccgcaccacggcctcc
tacgcgggaacacccgtgcagacgccgatcctggtggacggcaccttgaccgatgcctcc
gccctcgtcttctctcttggcgcaaggatgaccttctga
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