Novosphingobium decolorationis: HT578_17730
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Entry
HT578_17730 CDS
T07993
Name
(GenBank) conjugal transfer protein TraG
Organism
ndr
Novosphingobium decolorationis
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
QVM85287
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Position
complement(3847610..3849658)
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AA seq
682 aa
AA seq
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MTPTRLLIGQILVVIAIAFASIWTATQWAAASLAYQTQLGPAWFSLLGKPVYHPWSIFPW
WFSYDAYAPAIFDEAGAIAASGGFLGCGAAVAGSIWRARQKGSVTTYGSARWATRKDIAA
AGLLDERGVALGRIGGKYLRHDGPEHVMAFAPTRSGKGVGLVVPTLLSWTGSAVVHDIKG
ENWELTAGWRSRFSHCLLFNPTDSRSARYNPLLEVRRGTDEVRDAQNIADILVDPEGALE
RRNHWEKTSHSLLVGAILHVLHAEEEKTLARVATFLSDPQRPFTTTLRRMMTTNHLGTPE
APLVHPVVASAARELLNKSENERSGVLSTAMSFLGLYRDPTVAAVTSASDWRIADLVEAP
HPVSLYLVVPPSDISRTKPLIRLVLNQIGRRLTEKLQSPVPGKAPDTSRHRLLMMLDEFP
ALGRLDFFETSLAFLAGYGVRAFLIAQSLNQIEKAYGEHNSILDNCHVRIAFASNDERTA
KRISDTLGTATEQRAMRNYAGHRLAPWLAHVMVSRQETARALLTPGEVMQLAPTDELVLV
SGQPPIRAKKLRYYEDHAFTTRVLPAPVTGDEGFSDLPPARTDDWTGQIRSTDARLAAVN
DDSATVDDAGPEQARHPSHEVTPALTPPAEPVDALGLTHDETDEVTERAAMERAQTARTV
RSVYGLDAGSAHPGDLQLDFLS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgaccagactccttatcggacagattcttgtggtcatcgcgattgctttcgcg
agcatctggacggcaacgcaatgggcggccgcgagccttgcctatcagacccagctgggc
cccgcctggttcagccttctgggcaagcccgtctaccatccctggtcgatcttcccatgg
tggttttcctatgatgcttatgcgcctgccattttcgatgaagctggcgcgatcgccgca
tcgggaggatttctcgggtgcggtgcagctgttgccggatcgatctggcgcgcacgccag
aagggctcggtcaccacgtatggctcggcgcgctgggcaacccgcaaggatattgccgct
gccggacttctcgacgagcgcggtgttgccctcggccggatcggagggaagtacctgcgc
catgacgggcctgaacacgtcatggcgtttgcccccacgcgctcgggcaagggcgtcggc
ctcgtcgtccccacgctgctgtcctggacaggctccgcggtcgttcacgatatcaaaggt
gagaactgggaactgacggccgggtggagatcccgcttttcccattgccttctgttcaat
ccgacagacagccgctcggctcgctacaatccgctgctggaagtccggcgtggcacggac
gaagtgcgcgacgcccagaacattgccgatatcctggtcgaccccgaaggcgctctcgag
cggagaaatcactgggaaaagacgagccactcgctgctcgtgggcgccatccttcacgtg
ctccacgccgaagaagagaaaacgctcgctcgggtcgcgacctttctgtccgacccgcag
cgccccttcacaacgacgctgcgccgaatgatgaccacaaaccatctgggcacgccggag
gcacctctcgtccatcccgtcgtggcctcggccgcgcgtgaactgctcaacaaaagcgaa
aacgagcgctcgggcgttctgtcgaccgccatgtcgttcctcgggctctaccgggacccc
acagtcgcagccgtcacgtcagccagcgactggcggatcgcggacctcgtcgaagcgcca
cacccggtctcgctctacctcgtggtcccgccatccgacatcagccgcaccaagccgctg
atccgtctggtcctcaaccagatcggacgacgccttaccgaaaagctgcaatcgccggtt
cccggcaaggccccggacaccagccgccatcgccttctgatgatgctcgacgagtttcct
gcgctcggaaggctcgacttcttcgaaaccagccttgctttcctggcgggctacggagtg
cgcgccttcctgattgcccagagcctgaaccaaatcgagaaggcgtatggcgagcacaat
tcgatcctcgacaactgccatgtccgtatcgcgtttgcgagcaacgacgagcgcaccgct
aagcgcatttcagacactctggggaccgcaaccgagcagcgggcaatgcgcaactacgcg
ggtcaccggctcgcaccctggctcgcccatgtcatggtcagccgccaggaaaccgcacgc
gctctgctgaccccgggcgaggtaatgcagctggctccgaccgacgagctcgtgctcgtt
tccgggcagccgcccatccgggcaaagaagctgcgttactatgaggaccacgcgttcacc
acccgtgtcctgccggcgcccgtgacgggcgacgagggcttcagcgacctcccgcctgcc
cgcacagatgactggaccggacagatccgttccaccgacgcgcggcttgcagctgtaaat
gacgacagtgctacggtggacgacgccgggcctgaacaggcccgccatccttcgcacgaa
gttaccccggcattgacgcctccggccgaaccggtcgacgcgctgggcctcacgcatgac
gagactgatgaggtcaccgaacgggctgcaatggagagggctcagactgcgcgaacagtc
cggtccgtctacggccttgacgccggctcggcccatcccggtgatctgcagctggatttc
ctgtcatga
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