Novosphingobium decolorationis: HT578_18095
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Entry
HT578_18095 CDS
T07993
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr02020
Two-component system
ndr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HT578_18095
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HT578_18095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ndr02022
]
HT578_18095
02035 Bacterial motility proteins [BR:
ndr02035
]
HT578_18095
Two-component system [BR:
ndr02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HT578_18095
Bacterial motility proteins [BR:
ndr02035
]
Flagellar system
Flagellar assembly proteins
Others
HT578_18095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
HTH_20
HTH_28
AAA_3
HTH_23
Mg_chelatase
HTH_29
AAA_19
HTH_11
AAA_16
AAA
MerR
RP-C
Xre-like-HTH
HTH_24
HTH_1
AAA_7
Sigma70_r4_2
HTH_12
DUF2089
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
QVM85352
LinkDB
All DBs
Position
complement(3928730..3930034)
Genome browser
AA seq
434 aa
AA seq
DB search
MPGLTFSPEFGRLHGPLVQRASAVAGGLIDHTDIDLRDHADTAPARSSTRTVTLKRSSAA
SLSHDAQRVDIGYGDPLGETALAMLLAAMAAPGDPIAADPLSLSVLALAERIAASNIPVL
INGPTGTGKEVLSRFIHARSARRKGPFVAVNCAAMPETMLEAMLFGHRKGAFTGATEASE
GFMRAANGGTLLLDEIAELPLSLQAKLLRALQEQEVVPIGSTQAIPLDVRVIACANRDLP
TEVAEGRFRADLFYRLNVFPLELPALKARPEDIAPLAYAMALRHAETPGRVPCFSEAALV
MLKLHAWPGNVRELENVVRRALLLAFDSDVIAPQHIVFDSPARLLSPFEDERRSAEAAGD
AVTPDSKGRLSNIVQQSEARAIVETLETCGGNRQQAARELGISERTLRYRLASLREAGIE
IGRNCGARAAGGRR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtctgaccttcagcccggaattcggccgccttcacggcccgctcgtccagcgc
gccagcgcggtcgccggaggcctgatcgaccacaccgacatcgatctgcgcgatcacgcc
gacaccgcgcccgcgcgctccagcacgcgcacggtcacgctcaaacgcagctctgcggcc
agcctgtcccatgacgcgcagcgcgtggacatcggctacggcgatccgctgggcgaaacc
gcgctggccatgctgctcgccgccatggccgccccgggcgacccgattgcagcagatccc
ctcagcctctcggtcctggcgctggccgaacgcatcgcggccagcaacattcccgtgctc
atcaacggccccaccggcaccggcaaggaagtgctgagccgcttcatccatgcccgcagc
gcgcgccgcaaggggcccttcgtcgccgtcaactgcgccgcgatgcccgagaccatgctc
gaggccatgctgttcggccaccgcaagggcgcctttaccggcgcgaccgaggccagcgag
ggcttcatgcgcgcggccaacgggggcacgctgctgctcgacgaaatcgccgaactgccg
ctttcgctccaggccaagctgctgcgcgcgctgcaggaacaggaagtcgtgccgatcggc
tcgacccaggcgatcccgctcgacgtgcgcgtcatcgcctgcgccaaccgcgaccttccc
accgaagtcgccgaaggccgtttccgcgccgacctgttctaccgcctgaatgtcttcccg
ctcgagctgccggcactcaaggcgcggcccgaggacatcgccccgctcgcctacgcgatg
gcgctgcgccacgccgaaacgccgggccgggtcccctgcttcagcgaagccgcgctcgtc
atgctcaagctccacgcctggccgggcaacgtgcgcgaactggagaacgtggtgcgccgc
gcgctcctcctcgccttcgacagcgatgtcattgccccgcagcacatcgtcttcgacagc
ccggcacgcctgctctcccccttcgaggacgaacggcgcagcgccgaggccgcaggcgat
gccgtgacgcccgacagcaagggacgcctttccaacatcgtccagcagtccgaggcccgc
gccatcgtcgagacgctcgagacctgtggtggcaaccgccagcaggccgcgcgcgaactc
ggcatttcggagcgtaccttgcggtatcgtcttgcctcgctccgtgaagcgggcatcgag
atcggccgcaattgtggcgcccgcgccgccggaggccgtcgatga
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