KEGG   Novosphingobium decolorationis: HT578_18820
Entry
HT578_18820       CDS       T07993                                 
Name
(GenBank) VirB4 family type IV secretion/conjugal transfer ATPase
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
ndr  Novosphingobium decolorationis
Pathway
ndr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ndr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HT578_18820
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ndr02044]
    HT578_18820
Enzymes [BR:ndr01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HT578_18820
Secretion system [BR:ndr02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   HT578_18820
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_10 AAA_16 AAA_22 AAA_33 CbiA TrwB_AAD_bind ABC_tran AAA_24 AAA_7
Other DBs
NCBI-ProteinID: QVM85480
LinkDB
Position
4074678..4077113
AA seq 811 aa
MGRRFKDVLTGWAAREAVAGDRLPYAQLVDESVVRLRDGSLALALMVPGLAFETADTDEL
NAHVATREVLLRSSLDARFVLYHHVIRRRVEVELDGHFEDPLAAHIDARWRERTRSGDLF
VNDQFITLVRRPARGKAGWADRLSRSLRGNTSEDGTGIDPADVRALRAAATAMVASLGAY
GARLLGDYEGTTGTCSEVLELLSALYNGEMRPVRRPAAGTDIGHMLPYRRINFGLDALEL
RGADGRPAFGAMVSLKEYPDATSPGLTDALLRLPAEMVLTETYAPCDRQIARERIDLAIR
RLRSADEEAMAERSEMVSARDALGTGAVGFGDHHLSVLVRADTLDELDMVSAACAASLAD
AGAVAVREDANLEPAFWGQFPGNEEFLVRRALISSANMACFGSLHGFSLGQASGNHWGEA
VTLLATTSSTPFFFNFHQGDLGNFTVIGPSGSGKTVVMNFLAAQAQKFAPRTILFDKDRG
AEVFLRGIGGTYSRIAAGHPTGFNPLALSDTDANRAFLRDWLGVLLEAKGAEEMATIASA
VDAAYHNDASLRRLSHFRELLAGARRPEPGDLASRLDAWIAGGEHGWLFDNAEDRLDLDT
RVLGFDMTALLESPRLRTPVMMYLFHRIDERLDGEPTMILIDEGWKALDDEVFAARIRDW
LKTLRKRNALVGFATQSARDALDSRISTALVEQTATMLFMPNSRARPEDYCEGFGLSLHE
LEVIRTLPAHSRCFLIRQSDASVVVRLDLSGSPEVLTVLSGRESTVRKLDALRERYGDAP
RAWYPALTGQPWPGDSGAAAADDALWIEAAE
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgggtcgtcgcttcaaggacgtgctgacgggctgggccgccagggaagcggtggcgggc
gaccgtctgccctatgcgcagcttgtcgatgaaagcgttgtgcgcctgcgcgatgggtcg
ctggcgctggcgctgatggtgccgggcctcgcgttcgagaccgccgataccgacgaactc
aacgcccacgtggcgacgcgcgaggtgctgctgcgctcctcgctcgatgcgcgcttcgtg
ctctaccaccacgtcatccgccgccgcgtcgaggtcgaactcgacggccacttcgaggac
ccgctcgccgcgcatatcgacgcacgctggcgtgagcggacgcgctcgggggatctgttc
gtcaacgaccagttcattaccctggtgcgccgtcccgcacgcggcaaggcgggctgggcc
gatcgtctctcgcgcagcttgcggggcaacacgagcgaggatggcaccggtatcgacccc
gccgacgtgcgcgcgctgcgtgccgctgccaccgcgatggtggcctcgctcggcgcctac
ggtgcgcgacttctgggcgactacgaagggaccacggggacctgctcggaagtccttgaa
ctgctgagcgcgctctacaacggtgagatgcggcccgtgcgtcgtccggctgcgggcacc
gacatcggccacatgctgccctatcgccgcatcaacttcgggctcgatgcactggagctg
cgcggggccgatggccggcctgccttcggcgccatggtcagcctgaaggaataccccgat
gcgacttcgcccgggctgaccgacgcgctgctgcgcctgcccgccgagatggtgctgacc
gaaacctacgctccgtgtgatcgccagatcgcgcgcgagcgcatcgatcttgccattcgt
cgcctgcgttcggctgacgaggaagccatggccgagcggtccgaaatggtgtccgcgcgc
gacgccctgggcactggcgcggtcggctttggcgaccatcacctctcggtgctggtgcgc
gccgacacgctcgatgaactcgacatggtgagcgcggcctgcgccgcctcgctcgccgat
gcgggcgcggttgcggtgcgcgaggacgcgaacctggagcccgccttctgggggcagttc
cccgggaacgaggaattcctggtgcgccgcgcgctcatttccagtgcaaacatggcgtgt
ttcggctcgctccacggcttctcgctgggccaggcgagcggcaaccactggggcgaggca
gtgacgctgctcgcgaccaccagctcgaccccgttcttcttcaacttccaccagggtgat
cttggtaacttcaccgtcatcgggccgtcgggttcgggcaagacggtggtcatgaacttc
cttgccgcgcaggcgcagaagttcgcgccccgcacgatcctcttcgacaaggaccgcggc
gccgaggttttcctgcgcggcatcggcggcacctacagccgcatcgcggcgggccacccg
accggcttcaatccgctcgcgctgtccgataccgacgccaaccgcgcgttcctgcgcgac
tggctgggcgtcctgctcgaggccaagggtgccgaagagatggcgacgatagcgagcgca
gtcgatgcggcctatcacaacgatgcctcgctgcgccgtctttcgcactttcgcgaactg
ctggccggcgcgcgccggcccgagccgggcgatcttgcctcgcgtctcgatgcctggatt
gccgggggcgagcatggctggctcttcgacaacgccgaggaccggctcgatctcgacaca
cgtgtcctgggtttcgacatgaccgcgctcctggaaagcccgcgtctgcgcactccggtg
atgatgtacctgttccaccgcatcgacgagcgtctggacggcgagccgaccatgatcctc
atcgacgagggctggaaggcgctcgacgacgaggtcttcgccgcgcgcatccgcgactgg
ctcaagaccctgcgcaagcgcaacgcgctggtcggctttgccacccagtccgcgcgcgac
gcgctcgacagccgtatttcgaccgcgctggtcgagcagaccgcaaccatgctcttcatg
ccgaactcgcgcgcgcggcctgaggattactgcgagggcttcggcctgtcgctccacgaa
ctcgaagtgatccgcacgctcccggcgcattcgcgctgcttcctcatccgccagagcgac
gcctcggtcgtggtgcgtctcgacctttcgggcagtcccgaggtgctgacggtcctgtcg
ggccgcgagagtaccgtgcgcaagctcgatgccctgcgcgagcgctacggcgacgcgccg
cgcgcctggtaccccgcgcttaccggccagccttggccgggtgacagcggtgccgctgcg
gccgacgacgcgctctggatcgaggcggccgagtag

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