Novosphingobium decolorationis: HT578_19175
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Entry
HT578_19175 CDS
T07993
Name
(GenBank) autotransporter domain-containing protein
Organism
ndr
Novosphingobium decolorationis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Trypsin
Motif
Other DBs
NCBI-ProteinID:
QVM85543
UniProt:
A0ABX8E9T3
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All DBs
Position
complement(4155426..4158863)
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AA seq
1145 aa
AA seq
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MRIAQVSSRKVMRRSLLLGSAAGLALLSVEAGAQERPGQAWNTAHGAGSDATTVFEAAYR
QIQAPDVVNAPHIVVADPGNSTTSLDPEDVNGVGQMIIDQQNGFIGLCTGTLINPRTVIF
AAHCVNDRDPTTYGSTTGGVPIGFGFAQDNYNGLLDWYFGGNQSNPDLAFYNADWVNYHP
ASLEPAALSFLYGDVAMASLDTPAADVPTWALMFSPLPTPDEITDENGTGYHVKITGYGR
NGSGSTGDTGGIDYRRRAAENMLGALASFDQRDLFLFGSTSGLPQNLYMLDFDDPLRGTP
EANPYDFNLWKDAATPNEGTTAGGDSGGPLILDETYDIDVVIGVLSGGSRFFGPQPFSTY
GTMSFYQPLYLYWDWIAANNPYRYASAVEGDGAWEDPEHWVTITDPNYMVLDADGNLVNG
VPDAPGAGSAGSPDSFGHACFQLGGDDICEDMATGDIYIDGELVDASTPVTTDAGATVAV
GDLLARADDAAQATVTPFVLDAPTIANGLPGASGFVPDNDAGDPANGVRPTYYDVTLSAD
GTTTLSSAVTIDRFSMDGAGAALDITEDGSLTSLMSINQYQGMVRVDGELATNGDYMLMT
GGLQGSGMITTPYFTNVAGVIAPGGVGEIGTLTFNGNVILSSGSTYLVDLGPSGTSDLIA
VNPTMLDPADVPLDGMADIGGLVMFNPTGMVRDGDEYTILTATGGIEGEFDNWNAISAIL
TPELSYTDTEVLVTIEAGLYADVIDPSSNVQSAYAQLLDQNRAYYGNLAGVYGPLDMMGI
AGIQGTLEELAPREQPLLQSMATAALDTNSRFLRERIATVTAGNSGGTLSYYGSPSGALS
AFDTSNTAGTAPSMAGAGGAPGSVIEGALPDTMSAFVAGGYIDGKSDGAPTARPYAGDKF
DGYYLAGGLEISDGGTGFIGMALSYTRMEGDPGYPTRDVTGDMFQVNLYGGTRSASGFGI
DAQLSGGFWDFKTQRDVMIGTSEWSLRADDSPLVLSGEAGISQMIGMGGALSFTPRVAFR
YASVDFTRTKEVGGGPALQYDMDNYESAQARAGARLAANGAIKPYISATYVHDFQDKPGY
FGANFVGGRGPDAFFALPGDDQDWGEIGVGITTGGQIAVSLHAETTVWRNDLSYQSYRGT
VSVRF
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaggattgcacaagtttcgtctcgcaaggtgatgcgccgcagcctgcttctgggctcg
gcggcggggctcgcgctcctgtcggtcgaggctggcgcgcaggagcggccggggcaggcc
tggaacaccgcgcacggcgcgggcagcgatgccaccaccgtcttcgaggccgcctaccgc
cagatccaggcgcccgacgtcgtgaacgcgccgcacatcgtggtcgcggaccccggtaac
agcaccaccagcctcgaccccgaggacgtgaacggcgttggccagatgatcatcgaccag
cagaacggcttcatcggcctgtgcaccggaacgctgatcaacccgcgcacggtgatcttc
gccgcgcactgcgtgaacgatcgcgatcccaccacctacggctccaccactggcggcgtg
ccgatcggcttcggcttcgcgcaagacaactacaacggccttctcgactggtacttcggg
ggcaaccagtccaacccggacctggccttctacaacgcggactgggtgaactatcacccc
gcctcgctcgagcccgccgcgctctcgtttctctacggcgacgtcgcgatggcctcgctc
gacacgcccgccgccgacgtaccgacctgggcgctgatgttctcgccgctgcccacgccc
gatgagatcaccgacgagaatggcaccggctaccacgtcaagatcaccggctatggccgc
aatggctcgggctcgacgggcgacaccggcggcatcgactaccgccgccgcgccgccgag
aacatgctcggcgcgctcgccagcttcgaccagcgcgacctgttcctgttcggcagcacc
tcggggctcccgcagaacctctacatgctcgacttcgatgacccgctgcgcggaacgccg
gaggcgaacccctacgacttcaacttgtggaaggacgcggccacccccaacgagggcacg
accgcaggcggcgattcgggcggtccgctgatcctggatgagacctacgacatcgacgtc
gtcatcggcgtcctttcgggtggcagccgcttcttcgggccccagcctttcagcacctac
ggcacgatgagcttctaccagccgctctatctctactgggactggatcgcggccaacaac
ccctaccgctatgccagcgctgtcgagggtgacggagcctgggaagatcccgagcactgg
gtgaccatcaccgatcccaactacatggtgctcgacgccgacggcaacctcgtcaacggc
gtgcccgatgcccctggcgccggatcagccggcagcccggactcgttcggccacgcctgc
ttccagctgggcggcgacgacatctgcgaggacatggcgaccggcgatatctacatcgac
ggcgaacttgtcgatgcgagcacgccggtcaccaccgatgccggtgcgaccgtcgccgtc
ggggacctgctcgcccgcgccgacgacgcggcccaggccacggttaccccgtttgtcctc
gacgcgcccacgatcgccaacggccttcccggtgcgagcggtttcgtgcctgacaacgac
gcgggcgatcccgcgaacggcgtgcgtccgacctactacgacgtgacactgagcgcggac
ggtacgaccacgctctcgagcgcggtcaccatcgaccgcttttccatggacggtgcgggc
gcggccctcgacatcaccgaggacggctcgctcacctcgctcatgtcgatcaaccagtac
cagggcatggtgcgcgtcgacggcgaactcgccaccaacggcgactacatgctgatgacc
ggcggcctgcagggttcgggcatgatcaccacgccctacttcaccaacgtggccggcgtg
atcgcgccgggcggcgtgggcgagatcggcacgctgaccttcaatggcaacgtgatcctc
tcctcgggcagcacctacctcgtcgacctcgggccttcgggcacatccgacctgatcgcg
gtcaacccgacgatgctggacccggccgacgttccgctcgacggcatggccgacatcggc
ggtctggtcatgttcaatcccaccggcatggtgcgcgacggcgacgaatacaccatcctg
acggccacgggcggcatcgagggcgagttcgacaactggaacgcgatcagcgccatcctg
acgcccgagctcagctacaccgacaccgaggtcctggtcaccatcgaggccgggctctac
gccgatgtgatcgatccctcctcgaacgtgcagtccgcctacgcgcagctgctcgaccag
aaccgcgcgtactacggcaaccttgccggggtctacgggccgctcgacatgatggggatc
gcgggcattcagggcacgctcgaggaactggccccgcgtgagcagccgcttctccaatcg
atggcgaccgccgcactcgacaccaattcgcgcttcctgcgcgaacgtatcgcgacggtg
accgcgggcaattcggggggcaccctctcctactacggcagccccagcggcgccctgtcg
gcgttcgacaccagcaacaccgccggcacggccccgtccatggcgggtgcaggcggcgcg
ccgggctcggtcatcgagggcgccctgcccgacacgatgagcgccttcgtggccggtggc
tacatcgacggcaagagcgatggcgccccgaccgcacgcccttatgccggagacaagttc
gacggctactatcttgctggcggccttgaaatttcggacgggggcaccggcttcatcggc
atggcgctctcctacacccgcatggaaggcgacccgggctatcccacgcgcgatgtcacg
ggcgacatgttccaggtcaatctctacggcggcacgcgctcggcgagtggctttggtatc
gatgcccaactgagcggcggcttctgggacttcaagacgcagcgcgacgtgatgatcggc
accagcgaatggtcgctgcgcgccgacgattcgcctctcgtgctgagcggcgaggccggc
atcagccagatgatcggcatgggcggtgcgttgagcttcaccccgcgcgtcgccttccgc
tacgcctcggtcgacttcacccgcaccaaggaagtgggaggaggccccgccctgcagtac
gatatggacaactacgagagcgcccaggcccgtgccggcgcgcgtctcgccgccaacggg
gcgatcaagccctatatctcggcgacgtatgtccacgacttccaggacaagccgggctac
ttcggcgccaacttcgtgggtggccggggccccgacgccttcttcgccctgcccggcgac
gaccaggactggggcgagattggcgtgggcatcaccacaggtggccagatcgcggtttcg
ctccatgccgaaacgaccgtgtggcgcaacgacctgagctaccagtcctaccgcggcacg
gtcagcgtccgcttctga
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