Novosphingobium decolorationis: HT578_19365
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Entry
HT578_19365 CDS
T07993
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HT578_19365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ndr03021
]
HT578_19365
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_19365
Enzymes [BR:
ndr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HT578_19365
Transcription machinery [BR:
ndr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HT578_19365
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HT578_19365
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QVM85578
UniProt:
A0ABX8E8Y8
LinkDB
All DBs
Position
4188512..4189579
Genome browser
AA seq
355 aa
AA seq
DB search
MTVNIKNWQELKKPNSLEIKPGPDPKLKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMQGEGPKRLQLSATGPAQVKAGDI
AVSGDIEVMNKDLVICTLDEGAVLNMELTADTGKGYVPAVGNRPVDAPIGLIPVDSLYSP
VRQVSYKVENARVGQELDYDKLSLTVETDGTVAPEDAVAYSARILQDQLALFVHFEDIAP
VGQPAMVGMAAGGTQSQEESDTNQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQK
TEAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatcaagaactggcaggaactcaagaagccgaacagccttgagatcaag
ccgggacccgaccccaagctgaaggcaacgttcgttgccgaacctctcgagcgcggtttt
ggtcttacgctcggtaacgcgctgcggcgcgttcttctgtcttcgctgcagggcgctgca
attacctcgatcaagatcgagaacgtgctgcacgagttctcctcgctggccggtgtgcgt
gaagacgtcaccgacatcgtcctgaacgtgaagcagatcgccctcaagatgcagggcgaa
ggccccaagcgtctccagctctcggccactggcccggcgcaggtgaaggcgggcgatatc
gccgtttcgggcgacatcgaggtcatgaacaaggacctcgtgatctgcacgctcgacgag
ggtgcggtcctgaacatggaactcaccgcggacaccggcaagggctacgtacctgctgtc
ggtaaccgtccggttgacgcaccgatcggtcttatcccggtcgactcgctctactcgccg
gttcgccaggtgagctacaaggtcgagaacgcccgcgttggccaggagctcgactacgac
aagctcagcctgaccgtcgagaccgacggcaccgtggctcccgaagatgccgtggcctac
tcggcccgcatcctgcaggaccagctggcgctgttcgttcacttcgaggacattgctccc
gtgggtcagcccgccatggtcggcatggccgccggcggtacgcagagccaggaagagagc
gacaccaaccagctcaaccgttaccttctcaagaaggtcgacgagctcgagctgtcggtc
cgctcggccaactgcctcaagaacgacaacatcatctacatcggcgacctggtccagaag
actgaagccgagatgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaag
gaagtgctctcctcgatgggtctgcgcctcggcatggacatcccgggctggccgcccgag
aacatcgaagagatggccaagaagctggagcaggaactgctcggctga
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integrated database retrieval system
