Novosphingobium decolorationis: HT578_19425
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Entry
HT578_19425 CDS
T07993
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00010
Glycolysis / Gluconeogenesis
ndr00020
Citrate cycle (TCA cycle)
ndr00260
Glycine, serine and threonine metabolism
ndr00280
Valine, leucine and isoleucine degradation
ndr00310
Lysine degradation
ndr00380
Tryptophan metabolism
ndr00620
Pyruvate metabolism
ndr00630
Glyoxylate and dicarboxylate metabolism
ndr00640
Propanoate metabolism
ndr00670
One carbon pool by folate
ndr00785
Lipoic acid metabolism
ndr01100
Metabolic pathways
ndr01110
Biosynthesis of secondary metabolites
ndr01120
Microbial metabolism in diverse environments
ndr01200
Carbon metabolism
ndr01210
2-Oxocarboxylic acid metabolism
ndr01240
Biosynthesis of cofactors
Module
ndr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ndr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ndr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ndr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
HT578_19425 (lpdA)
00020 Citrate cycle (TCA cycle)
HT578_19425 (lpdA)
00620 Pyruvate metabolism
HT578_19425 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
HT578_19425 (lpdA)
00640 Propanoate metabolism
HT578_19425 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HT578_19425 (lpdA)
00280 Valine, leucine and isoleucine degradation
HT578_19425 (lpdA)
00310 Lysine degradation
HT578_19425 (lpdA)
00380 Tryptophan metabolism
HT578_19425 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HT578_19425 (lpdA)
00670 One carbon pool by folate
HT578_19425 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ndr04147
]
HT578_19425 (lpdA)
Enzymes [BR:
ndr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
HT578_19425 (lpdA)
Exosome [BR:
ndr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
HT578_19425 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
FAD_oxidored
NAD_binding_8
FAD_binding_2
GIDA
AlaDh_PNT_C
FAD_binding_3
3HCDH_N
RPA
Dicer_PBD
Motif
Other DBs
NCBI-ProteinID:
QVM85588
LinkDB
All DBs
Position
complement(4201661..4203058)
Genome browser
AA seq
465 aa
AA seq
DB search
MAEYDYDLLVIGAGPGGYVAAIRGAQLGLKTACAEGRETLGGTCLNVGCIPSKALLHASE
YFDAAANGAMASMGIKVTPELDLDTMQGQRKDAVKGLTGGIEFLFKKNKVDWLKGYAQFK
DAHTVEVNGETKTAKNIVIATGSSVTPLPGVEVDNAGGVVVDSTGALELGKVPGKMVVIG
GGVIGLELGSVWRRLGAEVTVVEYLDQLLPGMDGDVRKEAGKIFKKQGMTLKLKTKVTGV
EVKDGAAKVTVEPAAGGDAEVLDADVVLVAIGRKPNTDGLGLDKIGLELNQRGQIETDHD
FGTKVEGVWAIGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTQPEIAGV
GLTEEAAKEKGKVKTSKFPMMANSRAKTNHEPDGFVKVIADAETDRVLGVWCIASVAGTM
IAQVAQAMEFGATSEDIAYTCHAHPTHSEAIKEAAMGIQGKPIHT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatacgattacgacctgcttgtcatcggtgcgggcccgggcggctacgtcgcg
gcaatccgcggcgcgcagctgggtctcaagaccgcgtgcgccgaaggccgcgagacgctg
ggcggcacctgcctcaacgtgggctgcatcccctccaaggcgcttctgcacgcctcggaa
tacttcgacgcggctgccaacggcgcgatggccagcatgggcatcaaggtcacgcccgag
cttgacctcgatacgatgcagggccagcgcaaggacgcggtcaagggcctgaccggcggc
atcgagttcctcttcaagaagaacaaggtcgactggctcaagggctatgcgcagttcaag
gacgcgcacaccgtcgaagtgaacggcgagaccaagaccgccaagaacatcgtcatcgcc
accggttcgtcggtcacgccgcttcccggcgttgaagtcgacaacgcgggcggcgtggtc
gtcgacagcaccggcgcgcttgaactgggcaaggtcccgggcaagatggtcgtcatcggc
ggcggcgtgatcggtctggaactcggttcggtctggcgtcgtctcggcgccgaagtcacc
gtggtcgaatacctcgaccagctcctgcccggcatggacggggacgtgcgcaaggaagcc
ggcaagatcttcaagaagcagggcatgaccctcaagctgaagaccaaggtcaccggcgtc
gaggtcaaggacggcgcggccaaggtcaccgtcgaaccggccgctggcggcgatgccgaa
gtgctcgacgccgacgtcgtgctcgtcgcaatcggccgcaagcccaacaccgatggcctc
ggcctcgacaagatcggcctggaactgaaccagcgcggccagatcgagaccgaccacgac
ttcggcaccaaggtcgaaggcgtgtgggcgatcggcgacgtgatcccgggtccgatgctc
gcgcacaaggccgaggacgagggcattgccgttgcggagaacattgccggccttaccggc
atagtgaaccacgacgtcatcccgagcgtcgtctacacccagcccgaaatcgcgggcgtg
ggcctcaccgaggaagccgccaaggaaaagggcaaggtcaagacctccaagttcccgatg
atggccaactcgcgcgccaagaccaaccacgagcccgacggcttcgtgaaggtcatcgcg
gacgcggaaaccgaccgcgtgctcggcgtgtggtgcattgcctcggtcgcgggcaccatg
atcgcgcaggttgcgcaggccatggaattcggcgccacgtcggaagacatcgcctacacc
tgccacgcacatccgacccactcggaagcgatcaaggaagccgcgatgggcatccagggc
aagccgatccacacctga
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