Novosphingobium decolorationis: HT578_19440
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Entry
HT578_19440 CDS
T07993
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00020
Citrate cycle (TCA cycle)
ndr00640
Propanoate metabolism
ndr00660
C5-Branched dibasic acid metabolism
ndr00720
Other carbon fixation pathways
ndr01100
Metabolic pathways
ndr01110
Biosynthesis of secondary metabolites
ndr01120
Microbial metabolism in diverse environments
ndr01200
Carbon metabolism
Module
ndr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ndr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HT578_19440 (sucD)
00640 Propanoate metabolism
HT578_19440 (sucD)
00660 C5-Branched dibasic acid metabolism
HT578_19440 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
HT578_19440 (sucD)
Enzymes [BR:
ndr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
HT578_19440 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
QVM85591
LinkDB
All DBs
Position
complement(4207421..4208311)
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AA seq
296 aa
AA seq
DB search
MSILVDKNTKVITQGMTGKTGSFHTQAALDYGTQMVAGVTPGKGGTDHLGLPQFDTVAEA
KAVTGANASCVYVPPSGCADAILEAIDAEIELIVAITEGVPVLDMVRVKRALSGSKSRLI
GPNCPGLLTPGECKIGIMPANIFSKGSVGVVSRSGTLTYEAVFQTTNAGLGQTTAVGIGG
DPVNGTNFIDVLELFLADDETKSIIMIGEIGGSAEEEAAQFLKDEAKRGRKKPMAGFIAG
RTAPPGRRMGHAGAIVSGGQGGAEDKIAAMEEAGIRVAASPSLLGETLVEAIKEVA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctcgtcgacaagaataccaaggtcatcacgcagggtatgaccggcaagacc
ggcagcttccatacccaggccgcgcttgactatggcacccagatggttgccggcgtgacc
cccggcaagggcggtaccgatcacctgggcctgccccagttcgataccgtggccgaggcc
aaggccgtcaccggcgccaacgcctcgtgcgtctatgttccgccctcgggctgcgcggac
gccatcctcgaagccatcgatgccgagatcgaactgatcgtcgccatcaccgagggtgtt
cccgtgctcgacatggttcgcgtgaagcgcgccctttcgggttcgaagtcgcgcctcatc
ggccccaactgccctggcctgctcacccccggtgagtgcaagatcggcatcatgcccgcc
aacatcttctcgaagggttcggtcggcgtggtctcgcgctcgggcacgctgacctacgaa
gccgtgttccagaccaccaacgcgggccttggccagaccacggccgtcggcatcggcggt
gacccggtcaacggcaccaacttcatcgacgtcctcgagctcttcctcgccgacgacgag
accaagtcgatcatcatgatcggcgaaatcggcggctcggccgaagaggaagctgcacag
ttcctcaaggacgaagccaagcgtggccgcaagaagccgatggccggcttcatcgcgggc
cgtacggcgcctccgggccgccgcatgggccacgcaggcgcgattgtctcgggcggccag
ggcggcgccgaagacaagatcgcggcgatggaagaagccggcatccgcgtggccgccagc
ccctcgcttctgggcgagacgctggtcgaagccatcaaggaagtggcctga
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