Novosphingobium decolorationis: HT578_19495
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Entry
HT578_19495 CDS
T07993
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ndr01011
]
HT578_19495
Enzymes [BR:
ndr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HT578_19495
Peptidoglycan biosynthesis and degradation proteins [BR:
ndr01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HT578_19495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
QVM86340
LinkDB
All DBs
Position
complement(4219849..4220427)
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AA seq
192 aa
AA seq
DB search
MSLLVRALPLTTALACLALSACGGGTKYRPVSDTPVRIGPSYQVRGERYTPRAQPDYDML
GYAAWYGSESGSQTANGEKFHPAWITAAHRDLPLPTYVEVTALDTGRRILVRVNDRGPFA
ASSRIIDLSRGAAEELGIRAKGVAAVRVRRVEPEAKDRERLREGKPARKLPPLDTRALGN
LQRQFERGVGAL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ctgagcctcctcgtgcgcgcccttcccctcaccaccgcactcgcctgcctcgccctgagc
gcctgcgggggcggtacgaaataccgcccggtcagcgacacacccgtgcgtatcggcccc
agctaccaggtgcgcggggaacgctacacgccgcgtgcccagcccgactacgacatgctc
ggctatgccgcctggtacggcagcgagagcggcagccagaccgccaacggggagaagttt
cacccggcctggatcaccgccgcgcaccgcgacctgccgctgccgacctacgtcgaggtc
accgcgctcgacaccgggcggcgcatcctcgtgcgggtcaacgatcgggggccgtttgct
gcgagctcgcgcatcatcgacctctcgcgcggggcggccgaggaactgggcattcgcgcc
aagggcgtcgccgccgtacgggttcgccgcgtcgagcccgaggcgaaggaccgcgagcgt
ctgcgcgaaggcaagcctgcccgcaagctgccccctctcgacacgcgcgcactcggcaat
ctgcaacgccagttcgaacggggcgtcggcgcgctctga
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