Novosphingobium decolorationis: HT578_19815
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Entry
HT578_19815 CDS
T07993
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K05818
IclR family transcriptional regulator, mhp operon transcriptional activator
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ndr03000
]
HT578_19815
Transcription factors [BR:
ndr03000
]
Prokaryotic type
Helix-turn-helix
IclR family
HT578_19815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
MarR
IclR_C
TrmB
MarR_2
GAF_2
F-93_WHD
HTH_24
CarboxypepD_reg
GAF
HTH_Crp_2
HTH_27
HTH_29
Rrf2
Dimerisation
PCI
Motif
Other DBs
NCBI-ProteinID:
QVM85648
LinkDB
All DBs
Position
complement(4305361..4306203)
Genome browser
AA seq
280 aa
AA seq
DB search
MTQSHHDLGEARPRGEKDTIRSLSRSIHVIQAINRYGSLGLSEIAKAANVPMPTAFRIIN
TLIEEGLVERERERRKYRPTALIQTLACGFQNHDRLVNAARTVMSDFTHLHHWPLSIVTR
VGNRMVVRYHTAAQTTLTYNNYYPGWQVPILASASGQVYVAYTDELTRARLIDSAAELEE
AYGQYMLEQFQSGAATRRIRADGYATVEKSWYSANPGKTSAVAVPIFDGEELIGALAVVF
FAAGLSVDAAVERYLAPIQEVSRTIRANLAAGEMPGPVGD
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacacagtcccaccatgacctcggcgaggcgcgaccgcgcggcgaaaaggacacgata
cgctcgttatcgcgctcgattcatgtcattcaggccatcaatcgctatggttctctgggg
ctgtctgaaattgccaaggcggcgaacgtgccgatgcccaccgcctttcgcatcatcaac
accctgatcgaggaagggttggtcgaacgggagcgggagcgccgcaagtatcgtcccacc
gcgctcatccagacactggcctgtggctttcagaaccatgatcgcctggtgaatgccgca
cgcacggtgatgtccgatttcacgcacctgcatcactggccactgtccatcgtgacccgc
gtgggcaaccggatggtggtgcgctaccacacggccgcgcagaccacgcttacctacaat
aactactatcctggctggcaggtgccgattctcgcgtcggcttccggacaggtctatgtc
gcctacaccgatgagctgacccgtgcccgactgatcgacagcgccgccgaactggaagaa
gcctatggccagtacatgctcgagcagttccagtccggcgcggccacccggcgcattcgc
gccgacggctacgccacggtcgagaagtcctggtactcggccaatccgggcaagacgtcc
gcggtcgcggtgccgatcttcgatggcgaggagctcattggtgcgctggcagtcgtcttc
tttgccgccggcctgtcggtcgacgcggcggtcgagcgctacctcgcgccgatccaggag
gtttcgcgcaccattcgcgcgaacctcgcggcgggggaaatgcccggtcccgtaggggac
taa
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