Novosphingobium decolorationis: HT578_19880
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Entry
HT578_19880 CDS
T07993
Name
(GenBank) recombination protein O N-terminal domain-containing protein
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HT578_19880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_19880
DNA repair and recombination proteins [BR:
ndr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HT578_19880
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HT578_19880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QVM86354
UniProt:
A0ABX8EBI2
LinkDB
All DBs
Position
4317105..4317710
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AA seq
201 aa
AA seq
DB search
MELRTEAIVCAVRSHGEAAAIVRFLTQEEGVVAAYVAGARGRTLRPVLIPGNIVAVDIRA
RSEGQLPFARVELVRSRGPWLSEPLPAAAFSWLTSLTAASLPERHAYPALHQALGGLLEA
ICVAPSARGWALPLLSYEVLLLRELGYGVPVPRPDDRDWDAILRTFDRIGRELDRYPLAE
RRKDVMAARTQLRERLGRISD
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgtaccgaggcgatcgtctgcgccgtgcgctcgcacggcgaggcggcggcc
atcgtccgcttcctgacccaggaagagggcgtcgtcgcggcttatgtcgccggagcgcga
ggccgcaccttgcggcccgtgctcattcccggaaacatcgttgccgttgatatccgtgcg
cgttcggaagggcagctgcccttcgcgcgtgtcgaacttgtgcgctcgcgcggcccctgg
ctgtccgagcctttgcccgccgcagccttttcctggctgacctcgctcaccgccgcgagc
ctgcccgagcggcatgcctaccccgcgctccaccaggcgctgggtggtctgctggaggcg
atctgtgtggcaccgtccgcgcgcggatgggcgctgccgctcctctcctacgaggtcctg
ctgctgcgcgaactgggctacggcgtgcccgtgccgcgtccggatgaccgggactgggac
gcgattctgcggactttcgacaggatcgggcgcgaactggatcgctatccgcttgccgaa
cggcgcaaagacgttatggcggcccgcacccagctgcgcgagcggttggggcgaatttct
gactaa
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integrated database retrieval system
