Novosphingobium decolorationis: HT578_20820
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Entry
HT578_20820 CDS
T07993
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ndr03009
]
HT578_20820
Enzymes [BR:
ndr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HT578_20820
Ribosome biogenesis [BR:
ndr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HT578_20820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Motif
Other DBs
NCBI-ProteinID:
QVM85820
LinkDB
All DBs
Position
4521298..4522677
Genome browser
AA seq
459 aa
AA seq
DB search
MAPRRGRAACAQAFHRIAACRNDTGCASGLPVNEQNEEILRIASKGDGVTASGRFAWGAA
PGDILRADGTLEWGPHHIEPACKHFGRCGGCQLQQLDAETLEGFVEARVANASSSQELGA
ETITAPYLSPPGARRRASLRAESSGGRIVIGFREAKSHRLVELEECPVLVPEITALLGPI
RKLLITMGKAAPVKKGPRGKGGKNAKSSPNAMPRMACDIEMTLVDQGVDLGVKGLTAEGL
AAAEAMLDFAQSHGLARLTMDGGYGYETVWEPAPVTVTLGDTPVPFPPGTFLQATKDGED
ALVSAAREWIGDAAAVADLFSGLGTFALALAGPTCKVFAAEAARDVHLAGKSGADRAQCP
VFSAHRDLFRNPLMADELSKFEAVLLDPPRAGAREQVECIADSSVNRVVYISCNPSSWSR
DGARLIEAGFRLVELRPVGQFRWSTHVELASYFVRDAAE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggctccacggcgaggccgcgcggcttgcgcccaagcctttcaccgcatcgcagcttgc
cgaaacgatacaggctgcgctagcggcctgcctgtgaacgagcaaaacgaagaaatcctg
cgaatcgcctccaagggcgacggtgtaaccgcctcgggccgctttgcctggggcgcggcg
ccgggcgatatcctgcgcgccgatggtaccctcgaatggggaccgcaccacatcgagcca
gcctgcaagcacttcggacgctgcgggggctgccagctccagcagctcgatgccgaaacg
ctggagggcttcgtcgaggcgcgcgtggccaacgcctcctcctctcaggaactgggcgcg
gagacgattacggcgccctatctttcgccgccgggcgcgcgccgccgtgcgtcgctgcgc
gccgaaagctcgggcgggcgcatcgtcatcggctttcgggaagccaagtcgcaccggctc
gtcgagctggaggagtgcccggttctcgtccccgagatcaccgcgctgctgggcccgatc
cgcaagctgctcatcaccatgggcaaggccgcgccggtcaagaagggcccgcgcgggaag
gggggcaagaacgccaagtcctctccgaacgcgatgccgcgcatggcctgcgacatcgag
atgacgctggtcgaccagggcgtggacctgggcgtcaagggcctcaccgccgagggcctg
gccgcggccgaggcgatgctggacttcgcgcaaagccacggcctcgcgcgcctcaccatg
gacggtggctatggctacgagaccgtgtgggagcccgcgcccgtcactgtgacgctgggc
gatacgccggtgccgtttccgcccggaaccttccttcaggcgaccaaggacggcgaggac
gcgctcgtctcggccgcgcgcgaatggatcggcgatgcggccgccgtggccgacctgttc
tccggccttggcacattcgccctcgcgctggcggggccaacctgcaaggtctttgccgcc
gaagccgcgcgcgacgtgcatcttgccggcaagtcgggcgccgaccgcgcccagtgcccg
gtcttcagcgcccaccgcgatcttttccgcaacccgctcatggccgatgaactgtccaag
ttcgaagccgtcctcctcgacccgccccgcgccggcgcgcgcgagcaggtggagtgcatc
gcggattcgagcgtgaaccgcgtggtctacatctcgtgcaacccgtcgagctggtcacgc
gacggcgcgcgcctgatcgaggcaggcttccgcctcgtcgaactgcgccccgtcggccag
ttccgctggtccacccacgtcgaactggcgagctacttcgtgcgggatgccgctgagtga
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