Novosphingobium decolorationis: HT578_20925
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Entry
HT578_20925 CDS
T07993
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ndr
Novosphingobium decolorationis
Pathway
ndr00020
Citrate cycle (TCA cycle)
ndr00190
Oxidative phosphorylation
ndr00650
Butanoate metabolism
ndr00720
Other carbon fixation pathways
ndr01100
Metabolic pathways
ndr01110
Biosynthesis of secondary metabolites
ndr01120
Microbial metabolism in diverse environments
ndr01200
Carbon metabolism
Module
ndr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ndr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ndr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HT578_20925
00650 Butanoate metabolism
HT578_20925
09102 Energy metabolism
00190 Oxidative phosphorylation
HT578_20925
00720 Other carbon fixation pathways
HT578_20925
Enzymes [BR:
ndr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HT578_20925
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
Motif
Other DBs
NCBI-ProteinID:
QVM85840
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Position
4543403..4545223
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AA seq
606 aa
AA seq
DB search
MTQDKTGSAYKIIDHMYDTVVVGAGGSGLRATMGSAEAGLKTACITKVFPTRSHTVAAQG
GIAASLKNNTADHWTWHMYDTVKGSDWLGDQDAIEYMVREAPDAILELEHAGMPFSRNED
GTIYQRPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHTLYQQSLKYAADFFIEYFAIDLI
MDGGKCVGVIALCLDDGSIHRFRSQAVVLATGGYGRSYFTATSAHTCTGDGAGMVLRAGL
PLQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSR
SMALEIREGRGVGPNKDHIYLHLDHIDPKVLAQRLPGITESGKIFAGVDLTRQPLPVVPT
VHYNMGGIPTNYHGEVMTIGADGNPETVVPGLFAVGEAACVSVHGANRLGSNSLTDLVVF
GRATGHRLKETVKPGAAQPELPKDSADLALTRLDHFRYADGSTPTAEIRKEMQQNMSAHA
AVFRTEQLMAEGKAAMAATYQKMQDIKVSDRGLIWNSDLVETMELDNLIGAATVTLHGAH
AREESRGAHAHEDFPDRNDAEWMKHTAAWFNGWGGKGGEVRLDYRPVHEYTLTDDAEYIK
PKKRVY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacccaggataagactggttccgcctacaagatcattgaccacatgtatgacaccgtc
gtcgtcggcgccggtggctcgggtttgcgcgccacgatgggttcggccgaagccggcctg
aagaccgcgtgcatcaccaaggtcttccccacccgctcgcacaccgtggcggcgcagggc
ggtatcgcggcaagcctcaagaacaacacggccgaccactggacctggcacatgtacgac
accgtcaaggggtcggactggctgggtgaccaggacgcgatcgagtacatggtgcgcgaa
gcgcccgacgcgatcctcgagctggagcatgccggcatgcccttcagccgtaacgaggac
ggcacgatctaccagcgccccttcggcggccacatgcagaacatgggcgaaggcccgccg
gtgcagcgcacctgcgccgcggccgaccgtaccggtcacgccatgctgcacacgctgtac
cagcagtcgctgaagtacgcggcggacttcttcatcgaatacttcgccatcgacctcatc
atggacggtggcaagtgcgtcggcgtgatcgcgctgtgcctcgatgacggttcgatccac
cgcttccgttcgcaggccgtggtgctggcgaccggcggctatggccgcagctacttcacc
gcgacctcggcgcacacctgcaccggcgatggcgcgggcatggttctgcgcgcgggcctg
ccgctccaggacatggagttcgtgcagttccaccccaccggcatctacggtgcgggcgtg
ctcatcaccgaaggtgcgcgcggcgagggtggttacctcaccaactccgaaggcgagcgc
ttcatggagcgctatgccccgtcggccaaggacctcgcctcgcgcgacgtcgtctcgcgt
tcgatggcgctggaaatccgcgaaggtcgcggcgtgggcccgaacaaggaccacatctac
ctgcaccttgaccacatcgatcccaaggtgctggcacagcgcctcccgggcatcaccgag
tcgggcaagatcttcgcgggcgtcgacctgacccgtcagccgctgccggtcgttcccacc
gtccactacaacatgggcggcattcccacgaactaccacggcgaggtcatgacgatcggt
gccgacggcaaccccgaaacggttgtcccgggtctgttcgcggtgggtgaagcggcctgc
gtgtcggtccacggcgcgaaccgcctgggctcgaactcgctgaccgacctcgtggtgttc
ggccgcgcgaccggccaccgtctcaaggaaacggtcaagcccggcgcggcgcagcccgag
cttcccaaggactcggcggacctggcgcttacccgtctggaccacttccgctacgccgac
ggcagcacgcccacggccgagatccgcaaggaaatgcagcagaacatgtcggcccacgcc
gccgtgttccgcaccgagcagctcatggccgaaggcaaggccgccatggccgcgacctac
cagaagatgcaggacatcaaggtttcggaccgcggcctgatctggaactccgacctcgtc
gagacgatggagctggacaacctgatcggtgcggccaccgtgaccctgcacggcgcccat
gcgcgcgaggaaagccgtggcgcgcacgcgcacgaggacttcccggatcgcaacgacgcc
gagtggatgaagcacaccgcagcctggttcaacggctggggcggcaagggcggcgaggtt
cgcctcgactaccgtccggtgcacgaatacacgctcaccgacgatgccgagtacatcaag
cccaagaagcgcgtgtactga
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