Novosphingobium decolorationis: HT578_20995
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Entry
HT578_20995 CDS
T07993
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ndr
Novosphingobium decolorationis
Brite
KEGG Orthology (KO) [BR:
ndr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ndr03400
]
HT578_20995
Enzymes [BR:
ndr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HT578_20995
DNA repair and recombination proteins [BR:
ndr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HT578_20995
Prokaryotic type
HT578_20995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QVM85853
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All DBs
Position
4557493..4558869
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AA seq
458 aa
AA seq
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MSSPVIVWFRRDLRLSDQAALVEAAAKGPVVPVYVLDDETAKHRAMGGASRWWLHHSLES
LGAGLEEKGSRLILRRGRCEDVLPALAKEVGASEVHALRHYEPWWRNAEKAVGKALTLHL
HHGNYLAPPGSVTTGAGQPYKIFTPFWRALHERLPPPDPLYRPHTIAAPESWPESEALDD
WGLLPTRPDWAGGLRDFWTPGEEGAKARLKTFAEKASRYEGQRNLPARNGTSFLSPHLHF
GEISPAQVWHATSSAGGSVATFLSEIGWRDYAQNVILQYPDYGGTSAREGFDDFPWRSGG
QAQEDLEAWQQGRTGYPIVDAGMRELWHTGWMHNRVRMITASFLIKHLLIDWREGEKWFW
DTLVDADYASNAVNWQWNAGSGVDSNMFVRIMAPLSQSEKFDAAGYIRQWVPELADLPAG
EIHDPSPMARPKGYPQRLIEHRAGRERALGAWEQFKGE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacctgtaatcgtttggttccgccgggatcttcgtctttccgaccaggctgcg
ctggtcgaggccgccgcgaaggggccggtcgttcccgtctatgttctcgatgacgagacg
gccaagcatcgcgccatgggcggggcctcgcgctggtggctgcaccattcgctggaaagc
cttggcgcaggcctggaggagaagggctcgcgcctgatcctgcggcgcggcaggtgcgag
gatgtgctccccgctctggcgaaggaggtgggggcgagcgaggttcatgcgctgcgccat
tacgagccctggtggcgcaacgccgagaaggcggtgggcaaggcgctgacgctgcatctt
catcacggcaactacctggcgccgcccggatcggtgacgacgggcgcgggccagccctac
aagatcttcacgcccttctggcgcgcgctgcacgaacgcctgcccccgcccgatccgctc
tatcgcccgcacaccatcgccgcgcccgaaagctggcccgagagcgaggcgctggacgac
tggggtttgctcccgaccaggcccgactgggcagggggcttgcgcgatttctggacgccg
ggcgaggagggcgcgaaggcgcgcttgaagacctttgccgagaaagcctcgcgctacgaa
gggcagcgcaacctgccggcgcgaaacgggacctcgttcctttcgccccatctgcatttc
ggcgagatttccccggcgcaggtgtggcacgccacgtcttcggcgggcggttcggtggcg
acgttcctcagcgagatcggctggcgtgactacgcgcagaacgtgatcctgcagtacccc
gactatggcgggacctccgcgcgcgagggcttcgatgatttcccctggcgcagcggcggc
caggcgcaggaggacctggaggcctggcagcagggacgcaccggctatcccatcgtcgat
gccgggatgcgcgagctgtggcacaccggctggatgcacaaccgcgtgcgcatgattacg
gcgagcttcctcatcaagcacctgctgatcgactggcgcgaaggcgaaaagtggttctgg
gacacgctggtggatgcggactacgcctcgaacgcggtcaactggcagtggaacgctggc
tcgggtgtcgattcgaacatgttcgtgcggatcatggcgccgctcagccagtcggagaag
ttcgatgcggcgggctatatccggcagtgggtgcccgaactggccgatctgcccgcagga
gagatccacgatccttccccgatggcgcgccccaaaggctatccgcaaaggctgatcgaa
caccgcgccgggcgcgaacgcgcgctgggagcctgggagcagttcaagggggaatag
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